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Cluster: MGYG000003252_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003252_12 MGYG000003252_12_4 4102 6540 - PL30
pfam MGYG000003252_12 MGYG000003252_12_5 6546 7475 - DUF5017
TC MGYG000003252_12 MGYG000003252_12_6 7493 9115 - 8.A.46.1.3
TC MGYG000003252_12 MGYG000003252_12_7 9139 12303 - 1.B.14.6.1
CAZyme MGYG000003252_12 MGYG000003252_12_8 12368 13567 - GH88
NULL(UNKNOWN) MGYG000003252_12 MGYG000003252_12_9 13509 13763 - NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000003252_12 MGYG000003252_12_10 13839 17831 + HTH_AraC
CAZyme MGYG000003252_12 MGYG000003252_12_11 17938 19074 + GH117 | GH117
CAZyme MGYG000003252_12 MGYG000003252_12_12 19121 21148 + PL8
Gene ID: MGYG000003252_12_4
Type: CAZyme
Location: 4102 - 6540 (-)
Gene ID: MGYG000003252_12_5
Type: pfam
Location: 6546 - 7475 (-)
Gene ID: MGYG000003252_12_6
Type: TC
Location: 7493 - 9115 (-)
Gene ID: MGYG000003252_12_7
Type: TC
Location: 9139 - 12303 (-)
Gene ID: MGYG000003252_12_8
Type: CAZyme
Location: 12368 - 13567 (-)
Gene ID: MGYG000003252_12_9
Type:
Location: 13509 - 13763 (-)
Gene ID: MGYG000003252_12_10
Type: TF
Location: 13839 - 17831 (+)
Gene ID: MGYG000003252_12_11
Type: CAZyme
Location: 17938 - 19074 (+)
Gene ID: MGYG000003252_12_12
Type: CAZyme
Location: 19121 - 21148 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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