Cluster: MGYG000003252_CGC47
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_00079
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_113 | MGYG000003252_113_61 | 73685 | 74995 | - | 2.A.13.1.3 |
| pfam | MGYG000003252_113 | MGYG000003252_113_62 | 75177 | 76610 | + | Lyase_1 | FumaraseC_C |
| CAZyme | MGYG000003252_113 | MGYG000003252_113_63 | 76688 | 80236 | - | GH144 | GH3 |
| CAZyme | MGYG000003252_113 | MGYG000003252_113_64 | 80261 | 81931 | - | GH144 |
| pfam | MGYG000003252_113 | MGYG000003252_113_65 | 81939 | 82781 | - | Laminin_G_3 |
| TC | MGYG000003252_113 | MGYG000003252_113_66 | 82802 | 84316 | - | 8.A.46.1.3 |
| TC | MGYG000003252_113 | MGYG000003252_113_67 | 84341 | 87376 | - | 1.B.14.6.1 |
Gene ID: MGYG000003252_113_61
Type: TC
Location: 73685 - 74995 (-)
Type: TC
Location: 73685 - 74995 (-)
Gene ID: MGYG000003252_113_62
Type: pfam
Location: 75177 - 76610 (+)
Type: pfam
Location: 75177 - 76610 (+)
Gene ID: MGYG000003252_113_63
Type: CAZyme
Location: 76688 - 80236 (-)
Type: CAZyme
Location: 76688 - 80236 (-)
Gene ID: MGYG000003252_113_64
Type: CAZyme
Location: 80261 - 81931 (-)
Type: CAZyme
Location: 80261 - 81931 (-)
Gene ID: MGYG000003252_113_65
Type: pfam
Location: 81939 - 82781 (-)
Type: pfam
Location: 81939 - 82781 (-)
Gene ID: MGYG000003252_113_66
Type: TC
Location: 82802 - 84316 (-)
Type: TC
Location: 82802 - 84316 (-)
Gene ID: MGYG000003252_113_67
Type: TC
Location: 84341 - 87376 (-)
Type: TC
Location: 84341 - 87376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.