Cluster: MGYG000003252_CGC42
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 10
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_05708
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_107 | MGYG000003252_107_3 | 1792 | 2916 | + | 3.A.11.1.3 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_4 | 3271 | 5202 | - | PL11_1 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_5 | 5453 | 6577 | + | GH105 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_6 | 6608 | 9583 | + | GH2 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_7 | 9689 | 12637 | + | GH2 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_8 | 12772 | 14397 | - | GH28 |
| pfam | MGYG000003252_107 | MGYG000003252_107_9 | 14695 | 16317 | + | Peptidase_S9 | Lipase_GDSL | Lipase_GDSL_2 |
| TC | MGYG000003252_107 | MGYG000003252_107_10 | 16452 | 19604 | + | 1.B.14.6.1 |
| TC | MGYG000003252_107 | MGYG000003252_107_11 | 19620 | 21215 | + | 8.A.46.1.3 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_12 | 21247 | 24225 | + | GH2 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_13 | 24260 | 26194 | + | PL11_1 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_14 | 26255 | 27472 | + | GH154 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_15 | 27489 | 28730 | + | GH88 |
| CAZyme | MGYG000003252_107 | MGYG000003252_107_16 | 28737 | 30803 | + | GH2 |
Gene ID: MGYG000003252_107_3
Type: TC
Location: 1792 - 2916 (+)
Type: TC
Location: 1792 - 2916 (+)
Gene ID: MGYG000003252_107_4
Type: CAZyme
Location: 3271 - 5202 (-)
Type: CAZyme
Location: 3271 - 5202 (-)
Gene ID: MGYG000003252_107_5
Type: CAZyme
Location: 5453 - 6577 (+)
Type: CAZyme
Location: 5453 - 6577 (+)
Gene ID: MGYG000003252_107_6
Type: CAZyme
Location: 6608 - 9583 (+)
Type: CAZyme
Location: 6608 - 9583 (+)
Gene ID: MGYG000003252_107_7
Type: CAZyme
Location: 9689 - 12637 (+)
Type: CAZyme
Location: 9689 - 12637 (+)
Gene ID: MGYG000003252_107_8
Type: CAZyme
Location: 12772 - 14397 (-)
Type: CAZyme
Location: 12772 - 14397 (-)
Gene ID: MGYG000003252_107_9
Type: pfam
Location: 14695 - 16317 (+)
Type: pfam
Location: 14695 - 16317 (+)
Gene ID: MGYG000003252_107_10
Type: TC
Location: 16452 - 19604 (+)
Type: TC
Location: 16452 - 19604 (+)
Gene ID: MGYG000003252_107_11
Type: TC
Location: 19620 - 21215 (+)
Type: TC
Location: 19620 - 21215 (+)
Gene ID: MGYG000003252_107_12
Type: CAZyme
Location: 21247 - 24225 (+)
Type: CAZyme
Location: 21247 - 24225 (+)
Gene ID: MGYG000003252_107_13
Type: CAZyme
Location: 24260 - 26194 (+)
Type: CAZyme
Location: 24260 - 26194 (+)
Gene ID: MGYG000003252_107_14
Type: CAZyme
Location: 26255 - 27472 (+)
Type: CAZyme
Location: 26255 - 27472 (+)
Gene ID: MGYG000003252_107_15
Type: CAZyme
Location: 27489 - 28730 (+)
Type: CAZyme
Location: 27489 - 28730 (+)
Gene ID: MGYG000003252_107_16
Type: CAZyme
Location: 28737 - 30803 (+)
Type: CAZyme
Location: 28737 - 30803 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_107_4 | vegan > omnivore | 10.02981 | 0.00574 |
| MGYG000003252_107_4 | vegetarian > omnivore | 14.74626 | 0.00972 |
| MGYG000003252_107_5 | vegan > omnivore | 2.01320 | 0.00574 |
| MGYG000003252_107_5 | vegetarian > omnivore | 4.62785 | 0.00972 |
| MGYG000003252_107_7 | vegetarian > omnivore | 2.50785 | 0.03811 |