Cluster: MGYG000003252_CGC36
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_02285
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_72 | MGYG000003252_72_47 | 49786 | 51981 | + | GH92 |
| STP | MGYG000003252_72 | MGYG000003252_72_48 | 52120 | 53163 | - | FecR |
| TF | MGYG000003252_72 | MGYG000003252_72_49 | 53218 | 53967 | - | GerE |
| TC | MGYG000003252_72 | MGYG000003252_72_50 | 54133 | 57696 | + | 1.B.14.6.1 |
| pfam | MGYG000003252_72 | MGYG000003252_72_51 | 57708 | 59462 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000003252_72 | MGYG000003252_72_52 | 59502 | 60788 | + | GH43_17 |
| pfam | MGYG000003252_72 | MGYG000003252_72_53 | 60801 | 62324 | + | TIG | BACON |
| CAZyme | MGYG000003252_72 | MGYG000003252_72_54 | 62362 | 63438 | + | GH5_13 |
| CAZyme | MGYG000003252_72 | MGYG000003252_72_55 | 63542 | 65092 | - | GH20 |
Gene ID: MGYG000003252_72_47
Type: CAZyme
Location: 49786 - 51981 (+)
Type: CAZyme
Location: 49786 - 51981 (+)
Gene ID: MGYG000003252_72_48
Type: STP
Location: 52120 - 53163 (-)
Type: STP
Location: 52120 - 53163 (-)
Gene ID: MGYG000003252_72_49
Type: TF
Location: 53218 - 53967 (-)
Type: TF
Location: 53218 - 53967 (-)
Gene ID: MGYG000003252_72_50
Type: TC
Location: 54133 - 57696 (+)
Type: TC
Location: 54133 - 57696 (+)
Gene ID: MGYG000003252_72_51
Type: pfam
Location: 57708 - 59462 (+)
Type: pfam
Location: 57708 - 59462 (+)
Gene ID: MGYG000003252_72_52
Type: CAZyme
Location: 59502 - 60788 (+)
Type: CAZyme
Location: 59502 - 60788 (+)
Gene ID: MGYG000003252_72_53
Type: pfam
Location: 60801 - 62324 (+)
Type: pfam
Location: 60801 - 62324 (+)
Gene ID: MGYG000003252_72_54
Type: CAZyme
Location: 62362 - 63438 (+)
Type: CAZyme
Location: 62362 - 63438 (+)
Gene ID: MGYG000003252_72_55
Type: CAZyme
Location: 63542 - 65092 (-)
Type: CAZyme
Location: 63542 - 65092 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_72_48 | vegan > omnivore | 1.37127 | 0.00574 |
| MGYG000003252_72_48 | vegetarian > omnivore | 1.39748 | 0.00972 |
| MGYG000003252_72_49 | vegan > omnivore | 1.64624 | 0.00574 |
| MGYG000003252_72_49 | vegetarian > omnivore | 1.75813 | 0.01161 |
| MGYG000003252_72_50 | vegan > omnivore | 2.37931 | 0.00574 |
| MGYG000003252_72_50 | vegetarian > omnivore | 2.30649 | 0.00972 |
| MGYG000003252_72_53 | vegan > omnivore | 4.40164 | 0.00574 |
| MGYG000003252_72_53 | vegetarian > omnivore | 3.26514 | 0.01161 |