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Cluster: MGYG000003252_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003252_6 MGYG000003252_6_33 43687 46185 + 3.A.12.1.1
pfam MGYG000003252_6 MGYG000003252_6_34 46205 46852 + LolA_2
STP MGYG000003252_6 MGYG000003252_6_35 46891 47841 + Pyr_redox_2
TC MGYG000003252_6 MGYG000003252_6_36 48424 51504 + 1.B.14.6.13
TC MGYG000003252_6 MGYG000003252_6_37 51521 53086 + 8.A.46.2.1
CAZyme MGYG000003252_6 MGYG000003252_6_38 53115 54260 + GH18
pfam MGYG000003252_6 MGYG000003252_6_39 54302 55444 + BT_3987-like_N | Laminin_G_3
STP MGYG000003252_6 MGYG000003252_6_40 55603 56133 + Sigma70_r2 | Sigma70_r4_2
CAZyme MGYG000003252_6 MGYG000003252_6_41 56248 58677 - GH20
Gene ID: MGYG000003252_6_33
Type: TC
Location: 43687 - 46185 (+)
Gene ID: MGYG000003252_6_34
Type: pfam
Location: 46205 - 46852 (+)
Gene ID: MGYG000003252_6_35
Type: STP
Location: 46891 - 47841 (+)
Gene ID: MGYG000003252_6_36
Type: TC
Location: 48424 - 51504 (+)
Gene ID: MGYG000003252_6_37
Type: TC
Location: 51521 - 53086 (+)
Gene ID: MGYG000003252_6_38
Type: CAZyme
Location: 53115 - 54260 (+)
Gene ID: MGYG000003252_6_39
Type: pfam
Location: 54302 - 55444 (+)
Gene ID: MGYG000003252_6_40
Type: STP
Location: 55603 - 56133 (+)
Gene ID: MGYG000003252_6_41
Type: CAZyme
Location: 56248 - 58677 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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