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Cluster: MGYG000003252_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003252_52 MGYG000003252_52_138 232295 233728 + CE20
pfam MGYG000003252_52 MGYG000003252_52_139 233798 234670 - Exo_endo_phos
TF MGYG000003252_52 MGYG000003252_52_140 234690 238673 - HTH_AraC
CAZyme MGYG000003252_52 MGYG000003252_52_141 238830 239876 + GH130_4
TC MGYG000003252_52 MGYG000003252_52_142 239895 241142 + 2.A.1.33.2
CAZyme MGYG000003252_52 MGYG000003252_52_143 241309 242469 + GH130_3
TC MGYG000003252_52 MGYG000003252_52_144 242478 245645 + 1.B.14.6.1
Gene ID: MGYG000003252_52_138
Type: CAZyme
Location: 232295 - 233728 (+)
Gene ID: MGYG000003252_52_139
Type: pfam
Location: 233798 - 234670 (-)
Gene ID: MGYG000003252_52_140
Type: TF
Location: 234690 - 238673 (-)
Gene ID: MGYG000003252_52_141
Type: CAZyme
Location: 238830 - 239876 (+)
Gene ID: MGYG000003252_52_142
Type: TC
Location: 239895 - 241142 (+)
Gene ID: MGYG000003252_52_143
Type: CAZyme
Location: 241309 - 242469 (+)
Gene ID: MGYG000003252_52_144
Type: TC
Location: 242478 - 245645 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003252_52_141 vegetarian > vegan 2.61970 0.03570
MGYG000003252_52_142 vegetarian > omnivore 1.20237 0.03811

🧭 Explore Read Mapping of CGC

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