Cluster: MGYG000003252_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_01805
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_39 | MGYG000003252_39_29 | 49325 | 50776 | - | 3.A.1.147.2 |
| CAZyme | MGYG000003252_39 | MGYG000003252_39_30 | 50847 | 53006 | - | GH67 |
| CAZyme | MGYG000003252_39 | MGYG000003252_39_31 | 53017 | 53997 | - | GH43_1 |
| CAZyme | MGYG000003252_39 | MGYG000003252_39_32 | 54043 | 55179 | - | GH10 |
| TC | MGYG000003252_39 | MGYG000003252_39_33 | 55206 | 56690 | - | 2.A.2.3.6 |
| NULL(UNKNOWN) | MGYG000003252_39 | MGYG000003252_39_34 | 56712 | 56981 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003252_39 | MGYG000003252_39_35 | 57198 | 59099 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_39 | MGYG000003252_39_36 | 59128 | 62229 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000003252_39 | MGYG000003252_39_37 | 62410 | 62604 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003252_39 | MGYG000003252_39_38 | 62601 | 66719 | + | HTH_AraC |
| CAZyme | MGYG000003252_39 | MGYG000003252_39_39 | 66726 | 68726 | - | GH13_14 |
Gene ID: MGYG000003252_39_29
Type: TC
Location: 49325 - 50776 (-)
Type: TC
Location: 49325 - 50776 (-)
Gene ID: MGYG000003252_39_30
Type: CAZyme
Location: 50847 - 53006 (-)
Type: CAZyme
Location: 50847 - 53006 (-)
Gene ID: MGYG000003252_39_31
Type: CAZyme
Location: 53017 - 53997 (-)
Type: CAZyme
Location: 53017 - 53997 (-)
Gene ID: MGYG000003252_39_32
Type: CAZyme
Location: 54043 - 55179 (-)
Type: CAZyme
Location: 54043 - 55179 (-)
Gene ID: MGYG000003252_39_33
Type: TC
Location: 55206 - 56690 (-)
Type: TC
Location: 55206 - 56690 (-)
Gene ID: MGYG000003252_39_34
Type:
Location: 56712 - 56981 (-)
Type:
Location: 56712 - 56981 (-)
Gene ID: MGYG000003252_39_35
Type: pfam
Location: 57198 - 59099 (-)
Type: pfam
Location: 57198 - 59099 (-)
Gene ID: MGYG000003252_39_36
Type: TC
Location: 59128 - 62229 (-)
Type: TC
Location: 59128 - 62229 (-)
Gene ID: MGYG000003252_39_37
Type:
Location: 62410 - 62604 (+)
Type:
Location: 62410 - 62604 (+)
Gene ID: MGYG000003252_39_38
Type: TF
Location: 62601 - 66719 (+)
Type: TF
Location: 62601 - 66719 (+)
Gene ID: MGYG000003252_39_39
Type: CAZyme
Location: 66726 - 68726 (-)
Type: CAZyme
Location: 66726 - 68726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.