Cluster: MGYG000003252_CGC139
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_00297
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_607 | MGYG000003252_607_28 | 26276 | 27244 | - | GH43_29 |
| CAZyme | MGYG000003252_607 | MGYG000003252_607_29 | 27241 | 29223 | - | GH51_2 |
| CAZyme | MGYG000003252_607 | MGYG000003252_607_30 | 29250 | 30791 | - | GH43_4 |
| TF | MGYG000003252_607 | MGYG000003252_607_31 | 30947 | 35212 | + | HTH_AraC |
| NULL(UNKNOWN) | MGYG000003252_607 | MGYG000003252_607_32 | 35410 | 35553 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003252_607 | MGYG000003252_607_33 | 35519 | 38728 | + | 1.B.14.6.1 |
| pfam | MGYG000003252_607 | MGYG000003252_607_34 | 38768 | 40519 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003252_607 | MGYG000003252_607_35 | 40564 | 42348 | + | Big_3 |
| CAZyme | MGYG000003252_607 | MGYG000003252_607_36 | 42383 | 44311 | + | GH43_4 |
| sulfatase | MGYG000003252_607 | MGYG000003252_607_37 | 44482 | 45621 | + | S1_22 |
| TC | MGYG000003252_607 | MGYG000003252_607_38 | 45647 | 47341 | + | 2.A.21.3.19 |
Gene ID: MGYG000003252_607_28
Type: CAZyme
Location: 26276 - 27244 (-)
Type: CAZyme
Location: 26276 - 27244 (-)
Gene ID: MGYG000003252_607_29
Type: CAZyme
Location: 27241 - 29223 (-)
Type: CAZyme
Location: 27241 - 29223 (-)
Gene ID: MGYG000003252_607_30
Type: CAZyme
Location: 29250 - 30791 (-)
Type: CAZyme
Location: 29250 - 30791 (-)
Gene ID: MGYG000003252_607_31
Type: TF
Location: 30947 - 35212 (+)
Type: TF
Location: 30947 - 35212 (+)
Gene ID: MGYG000003252_607_32
Type:
Location: 35410 - 35553 (+)
Type:
Location: 35410 - 35553 (+)
Gene ID: MGYG000003252_607_33
Type: TC
Location: 35519 - 38728 (+)
Type: TC
Location: 35519 - 38728 (+)
Gene ID: MGYG000003252_607_34
Type: pfam
Location: 38768 - 40519 (+)
Type: pfam
Location: 38768 - 40519 (+)
Gene ID: MGYG000003252_607_35
Type: pfam
Location: 40564 - 42348 (+)
Type: pfam
Location: 40564 - 42348 (+)
Gene ID: MGYG000003252_607_36
Type: CAZyme
Location: 42383 - 44311 (+)
Type: CAZyme
Location: 42383 - 44311 (+)
Gene ID: MGYG000003252_607_37
Type: sulfatase
Location: 44482 - 45621 (+)
Type: sulfatase
Location: 44482 - 45621 (+)
Gene ID: MGYG000003252_607_38
Type: TC
Location: 45647 - 47341 (+)
Type: TC
Location: 45647 - 47341 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.