Cluster: MGYG000003252_CGC134
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_04315
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_590 | MGYG000003252_590_4 | 2663 | 3958 | + | GH23 |
| STP | MGYG000003252_590 | MGYG000003252_590_5 | 4031 | 6274 | + | HD |
| NULL(UNKNOWN) | MGYG000003252_590 | MGYG000003252_590_6 | 6354 | 8411 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003252_590 | MGYG000003252_590_7 | 8431 | 9621 | - | GH105 |
| NULL(UNKNOWN) | MGYG000003252_590 | MGYG000003252_590_8 | 9654 | 11663 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000003252_590 | MGYG000003252_590_9 | 11692 | 12672 | - | S09.UPB |
| CAZyme | MGYG000003252_590 | MGYG000003252_590_10 | 12669 | 13433 | - | CE12 |
| CAZyme | MGYG000003252_590 | MGYG000003252_590_11 | 13478 | 15082 | - | GH28 |
| CAZyme | MGYG000003252_590 | MGYG000003252_590_12 | 15107 | 18151 | - | GH2 |
| NULL(UNKNOWN) | MGYG000003252_590 | MGYG000003252_590_13 | 18181 | 19875 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003252_590 | MGYG000003252_590_14 | 19889 | 21709 | - | 8.A.46.1.3 |
| TC | MGYG000003252_590 | MGYG000003252_590_15 | 21721 | 24984 | - | 1.B.14.6.1 |
| TF | MGYG000003252_590 | MGYG000003252_590_16 | 25006 | 28914 | - | HTH_AraC |
| TF | MGYG000003252_590 | MGYG000003252_590_17 | 29204 | 29545 | - | MerR |
| TC | MGYG000003252_590 | MGYG000003252_590_18 | 29570 | 30622 | - | 1.A.34.1.3 |
Gene ID: MGYG000003252_590_4
Type: CAZyme
Location: 2663 - 3958 (+)
Type: CAZyme
Location: 2663 - 3958 (+)
Gene ID: MGYG000003252_590_5
Type: STP
Location: 4031 - 6274 (+)
Type: STP
Location: 4031 - 6274 (+)
Gene ID: MGYG000003252_590_6
Type:
Location: 6354 - 8411 (-)
Type:
Location: 6354 - 8411 (-)
Gene ID: MGYG000003252_590_7
Type: CAZyme
Location: 8431 - 9621 (-)
Type: CAZyme
Location: 8431 - 9621 (-)
Gene ID: MGYG000003252_590_8
Type:
Location: 9654 - 11663 (-)
Type:
Location: 9654 - 11663 (-)
Gene ID: MGYG000003252_590_9
Type: peptidase
Location: 11692 - 12672 (-)
Type: peptidase
Location: 11692 - 12672 (-)
Gene ID: MGYG000003252_590_10
Type: CAZyme
Location: 12669 - 13433 (-)
Type: CAZyme
Location: 12669 - 13433 (-)
Gene ID: MGYG000003252_590_11
Type: CAZyme
Location: 13478 - 15082 (-)
Type: CAZyme
Location: 13478 - 15082 (-)
Gene ID: MGYG000003252_590_12
Type: CAZyme
Location: 15107 - 18151 (-)
Type: CAZyme
Location: 15107 - 18151 (-)
Gene ID: MGYG000003252_590_13
Type:
Location: 18181 - 19875 (-)
Type:
Location: 18181 - 19875 (-)
Gene ID: MGYG000003252_590_14
Type: TC
Location: 19889 - 21709 (-)
Type: TC
Location: 19889 - 21709 (-)
Gene ID: MGYG000003252_590_15
Type: TC
Location: 21721 - 24984 (-)
Type: TC
Location: 21721 - 24984 (-)
Gene ID: MGYG000003252_590_16
Type: TF
Location: 25006 - 28914 (-)
Type: TF
Location: 25006 - 28914 (-)
Gene ID: MGYG000003252_590_17
Type: TF
Location: 29204 - 29545 (-)
Type: TF
Location: 29204 - 29545 (-)
Gene ID: MGYG000003252_590_18
Type: TC
Location: 29570 - 30622 (-)
Type: TC
Location: 29570 - 30622 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.