Cluster: MGYG000003252_CGC129
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_10934
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_569 | MGYG000003252_569_1 | 260 | 1459 | + | GH88 |
| TF | MGYG000003252_569 | MGYG000003252_569_2 | 1522 | 5610 | + | HTH_AraC |
| CAZyme | MGYG000003252_569 | MGYG000003252_569_3 | 5779 | 7188 | + | GH29 |
| TC | MGYG000003252_569 | MGYG000003252_569_4 | 7226 | 10468 | + | 1.B.14.6.1 |
| pfam | MGYG000003252_569 | MGYG000003252_569_5 | 10479 | 12251 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_569 | MGYG000003252_569_6 | 12276 | 15257 | + | 1.B.14.6.13 |
| pfam | MGYG000003252_569 | MGYG000003252_569_7 | 15270 | 16958 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000003252_569 | MGYG000003252_569_8 | 16975 | 19098 | + | PL12_2 |
| CAZyme | MGYG000003252_569 | MGYG000003252_569_9 | 19332 | 21692 | + | GH141 | GH141 |
| pfam | MGYG000003252_569 | MGYG000003252_569_10 | 21726 | 23177 | - | GHL10 |
| TC | MGYG000003252_569 | MGYG000003252_569_11 | 23286 | 24716 | + | 2.A.114.1.4 |
Gene ID: MGYG000003252_569_1
Type: CAZyme
Location: 260 - 1459 (+)
Type: CAZyme
Location: 260 - 1459 (+)
Gene ID: MGYG000003252_569_2
Type: TF
Location: 1522 - 5610 (+)
Type: TF
Location: 1522 - 5610 (+)
Gene ID: MGYG000003252_569_3
Type: CAZyme
Location: 5779 - 7188 (+)
Type: CAZyme
Location: 5779 - 7188 (+)
Gene ID: MGYG000003252_569_4
Type: TC
Location: 7226 - 10468 (+)
Type: TC
Location: 7226 - 10468 (+)
Gene ID: MGYG000003252_569_5
Type: pfam
Location: 10479 - 12251 (+)
Type: pfam
Location: 10479 - 12251 (+)
Gene ID: MGYG000003252_569_6
Type: TC
Location: 12276 - 15257 (+)
Type: TC
Location: 12276 - 15257 (+)
Gene ID: MGYG000003252_569_7
Type: pfam
Location: 15270 - 16958 (+)
Type: pfam
Location: 15270 - 16958 (+)
Gene ID: MGYG000003252_569_8
Type: CAZyme
Location: 16975 - 19098 (+)
Type: CAZyme
Location: 16975 - 19098 (+)
Gene ID: MGYG000003252_569_9
Type: CAZyme
Location: 19332 - 21692 (+)
Type: CAZyme
Location: 19332 - 21692 (+)
Gene ID: MGYG000003252_569_10
Type: pfam
Location: 21726 - 23177 (-)
Type: pfam
Location: 21726 - 23177 (-)
Gene ID: MGYG000003252_569_11
Type: TC
Location: 23286 - 24716 (+)
Type: TC
Location: 23286 - 24716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_569_9 | vegan > omnivore | 1.12064 | 0.00574 |