Cluster: MGYG000003252_CGC126
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_06392
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_555 | MGYG000003252_555_7 | 7573 | 9045 | - | 8.A.46.1.4 |
| TC | MGYG000003252_555 | MGYG000003252_555_8 | 9059 | 12115 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000003252_555 | MGYG000003252_555_9 | 12136 | 12831 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003252_555 | MGYG000003252_555_10 | 12869 | 13981 | - | GH105 |
| TF | MGYG000003252_555 | MGYG000003252_555_11 | 14193 | 18266 | - | HTH_AraC |
| CAZyme | MGYG000003252_555 | MGYG000003252_555_12 | 18674 | 21013 | + | GH3 |
| pfam | MGYG000003252_555 | MGYG000003252_555_13 | 21084 | 22637 | - | Laminin_G_3 |
| pfam | MGYG000003252_555 | MGYG000003252_555_14 | 22675 | 24603 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_555 | MGYG000003252_555_15 | 24619 | 27837 | - | 1.B.14.6.1 |
| CAZyme | MGYG000003252_555 | MGYG000003252_555_16 | 27904 | 29295 | - | GH76 |
Gene ID: MGYG000003252_555_7
Type: TC
Location: 7573 - 9045 (-)
Type: TC
Location: 7573 - 9045 (-)
Gene ID: MGYG000003252_555_8
Type: TC
Location: 9059 - 12115 (-)
Type: TC
Location: 9059 - 12115 (-)
Gene ID: MGYG000003252_555_9
Type:
Location: 12136 - 12831 (-)
Type:
Location: 12136 - 12831 (-)
Gene ID: MGYG000003252_555_10
Type: CAZyme
Location: 12869 - 13981 (-)
Type: CAZyme
Location: 12869 - 13981 (-)
Gene ID: MGYG000003252_555_11
Type: TF
Location: 14193 - 18266 (-)
Type: TF
Location: 14193 - 18266 (-)
Gene ID: MGYG000003252_555_12
Type: CAZyme
Location: 18674 - 21013 (+)
Type: CAZyme
Location: 18674 - 21013 (+)
Gene ID: MGYG000003252_555_13
Type: pfam
Location: 21084 - 22637 (-)
Type: pfam
Location: 21084 - 22637 (-)
Gene ID: MGYG000003252_555_14
Type: pfam
Location: 22675 - 24603 (-)
Type: pfam
Location: 22675 - 24603 (-)
Gene ID: MGYG000003252_555_15
Type: TC
Location: 24619 - 27837 (-)
Type: TC
Location: 24619 - 27837 (-)
Gene ID: MGYG000003252_555_16
Type: CAZyme
Location: 27904 - 29295 (-)
Type: CAZyme
Location: 27904 - 29295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_555_16 | vegan > omnivore | 1.17140 | 0.00574 |