Cluster: MGYG000003252_CGC125
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_04404
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_552 | MGYG000003252_552_29 | 43474 | 44748 | + | 2.A.1.7.1 |
| sulfatase | MGYG000003252_552 | MGYG000003252_552_30 | 44773 | 45789 | + | S1_16 |
| CAZyme | MGYG000003252_552 | MGYG000003252_552_31 | 45956 | 48541 | + | GH3 |
| pfam | MGYG000003252_552 | MGYG000003252_552_32 | 48731 | 50470 | - | PDDEXK_9 | AAA-ATPase_like |
| CAZyme | MGYG000003252_552 | MGYG000003252_552_33 | 50914 | 53268 | - | GH2 |
| CAZyme | MGYG000003252_552 | MGYG000003252_552_34 | 53302 | 54687 | - | CBM6 | GH43_29 |
| CAZyme | MGYG000003252_552 | MGYG000003252_552_35 | 54996 | 56594 | + | CBM91 | GH43_10 |
| NULL(UNKNOWN) | MGYG000003252_552 | MGYG000003252_552_36 | 56654 | 57121 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003252_552 | MGYG000003252_552_37 | 57337 | 61302 | + | HTH_AraC |
| CAZyme | MGYG000003252_552 | MGYG000003252_552_38 | 61480 | 63246 | + | GH30 |
| TC | MGYG000003252_552 | MGYG000003252_552_39 | 63398 | 66676 | + | 1.B.14.6.1 |
Gene ID: MGYG000003252_552_29
Type: TC
Location: 43474 - 44748 (+)
Type: TC
Location: 43474 - 44748 (+)
Gene ID: MGYG000003252_552_30
Type: sulfatase
Location: 44773 - 45789 (+)
Type: sulfatase
Location: 44773 - 45789 (+)
Gene ID: MGYG000003252_552_31
Type: CAZyme
Location: 45956 - 48541 (+)
Type: CAZyme
Location: 45956 - 48541 (+)
Gene ID: MGYG000003252_552_32
Type: pfam
Location: 48731 - 50470 (-)
Type: pfam
Location: 48731 - 50470 (-)
Gene ID: MGYG000003252_552_33
Type: CAZyme
Location: 50914 - 53268 (-)
Type: CAZyme
Location: 50914 - 53268 (-)
Gene ID: MGYG000003252_552_34
Type: CAZyme
Location: 53302 - 54687 (-)
Type: CAZyme
Location: 53302 - 54687 (-)
Gene ID: MGYG000003252_552_35
Type: CAZyme
Location: 54996 - 56594 (+)
Type: CAZyme
Location: 54996 - 56594 (+)
Gene ID: MGYG000003252_552_36
Type:
Location: 56654 - 57121 (-)
Type:
Location: 56654 - 57121 (-)
Gene ID: MGYG000003252_552_37
Type: TF
Location: 57337 - 61302 (+)
Type: TF
Location: 57337 - 61302 (+)
Gene ID: MGYG000003252_552_38
Type: CAZyme
Location: 61480 - 63246 (+)
Type: CAZyme
Location: 61480 - 63246 (+)
Gene ID: MGYG000003252_552_39
Type: TC
Location: 63398 - 66676 (+)
Type: TC
Location: 63398 - 66676 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_552_38 | vegan > omnivore | 3.60797 | 0.00574 |
| MGYG000003252_552_38 | vegetarian > omnivore | 2.60297 | 0.03811 |
| MGYG000003252_552_39 | vegan > omnivore | 3.10560 | 0.00574 |
| MGYG000003252_552_39 | vegetarian > omnivore | 1.32435 | 0.03811 |