Cluster: MGYG000003252_CGC117
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_05726
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_478 | MGYG000003252_478_67 | 104939 | 106927 | - | 8.A.46.2.2 |
| TC | MGYG000003252_478 | MGYG000003252_478_68 | 106939 | 110217 | - | 1.B.14.6.2 |
| NULL(UNKNOWN) | MGYG000003252_478 | MGYG000003252_478_69 | 110667 | 113249 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_70 | 113451 | 115712 | - | GH92 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_71 | 115749 | 118991 | - | GH2 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_72 | 119373 | 121886 | + | CBM6 | CBM6 | GH43_2 |
| NULL(UNKNOWN) | MGYG000003252_478 | MGYG000003252_478_73 | 121918 | 123417 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_74 | 123537 | 124799 | + | GH32 |
| pfam | MGYG000003252_478 | MGYG000003252_478_75 | 124904 | 125776 | - | Aldose_epim |
| TC | MGYG000003252_478 | MGYG000003252_478_76 | 126005 | 129115 | + | 1.B.14.6.1 |
| TC | MGYG000003252_478 | MGYG000003252_478_77 | 129146 | 130852 | + | 8.A.46.1.3 |
| pfam | MGYG000003252_478 | MGYG000003252_478_78 | 130895 | 132286 | + | DUF4960 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_79 | 132319 | 133887 | + | GH32 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_80 | 134017 | 135849 | + | GH32 |
| TC | MGYG000003252_478 | MGYG000003252_478_81 | 136242 | 137411 | + | 2.A.1.7.17 |
Gene ID: MGYG000003252_478_67
Type: TC
Location: 104939 - 106927 (-)
Type: TC
Location: 104939 - 106927 (-)
Gene ID: MGYG000003252_478_68
Type: TC
Location: 106939 - 110217 (-)
Type: TC
Location: 106939 - 110217 (-)
Gene ID: MGYG000003252_478_69
Type:
Location: 110667 - 113249 (-)
Type:
Location: 110667 - 113249 (-)
Gene ID: MGYG000003252_478_70
Type: CAZyme
Location: 113451 - 115712 (-)
Type: CAZyme
Location: 113451 - 115712 (-)
Gene ID: MGYG000003252_478_71
Type: CAZyme
Location: 115749 - 118991 (-)
Type: CAZyme
Location: 115749 - 118991 (-)
Gene ID: MGYG000003252_478_72
Type: CAZyme
Location: 119373 - 121886 (+)
Type: CAZyme
Location: 119373 - 121886 (+)
Gene ID: MGYG000003252_478_73
Type:
Location: 121918 - 123417 (+)
Type:
Location: 121918 - 123417 (+)
Gene ID: MGYG000003252_478_74
Type: CAZyme
Location: 123537 - 124799 (+)
Type: CAZyme
Location: 123537 - 124799 (+)
Gene ID: MGYG000003252_478_75
Type: pfam
Location: 124904 - 125776 (-)
Type: pfam
Location: 124904 - 125776 (-)
Gene ID: MGYG000003252_478_76
Type: TC
Location: 126005 - 129115 (+)
Type: TC
Location: 126005 - 129115 (+)
Gene ID: MGYG000003252_478_77
Type: TC
Location: 129146 - 130852 (+)
Type: TC
Location: 129146 - 130852 (+)
Gene ID: MGYG000003252_478_78
Type: pfam
Location: 130895 - 132286 (+)
Type: pfam
Location: 130895 - 132286 (+)
Gene ID: MGYG000003252_478_79
Type: CAZyme
Location: 132319 - 133887 (+)
Type: CAZyme
Location: 132319 - 133887 (+)
Gene ID: MGYG000003252_478_80
Type: CAZyme
Location: 134017 - 135849 (+)
Type: CAZyme
Location: 134017 - 135849 (+)
Gene ID: MGYG000003252_478_81
Type: TC
Location: 136242 - 137411 (+)
Type: TC
Location: 136242 - 137411 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_478_75 | vegan > omnivore | 1.09040 | 0.00574 |
| MGYG000003252_478_80 | vegetarian > omnivore | 1.06068 | 0.01161 |