Cluster: MGYG000003252_CGC116
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_06744
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_478 | MGYG000003252_478_33 | 44301 | 45725 | - | GH105 |
| TF | MGYG000003252_478 | MGYG000003252_478_34 | 45931 | 50253 | + | HTH_AraC |
| NULL(UNKNOWN) | MGYG000003252_478 | MGYG000003252_478_35 | 50163 | 50573 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_36 | 50642 | 52207 | - | PL9_1 |
| pfam | MGYG000003252_478 | MGYG000003252_478_37 | 52438 | 54090 | + | Mfa_like_1 |
| NULL(UNKNOWN) | MGYG000003252_478 | MGYG000003252_478_38 | 54181 | 54957 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003252_478 | MGYG000003252_478_39 | 55090 | 58155 | + | 1.B.14.6.1 |
| pfam | MGYG000003252_478 | MGYG000003252_478_40 | 58192 | 59718 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_41 | 59733 | 61703 | + | PL11_1 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_42 | 61731 | 63356 | + | CBM91 | GH43_10 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_43 | 63388 | 64590 | + | GH88 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_44 | 64580 | 65794 | + | GH154 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_45 | 65799 | 68360 | + | PL26 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_46 | 68380 | 70761 | + | GH2 |
| CAZyme | MGYG000003252_478 | MGYG000003252_478_47 | 70758 | 71837 | + | GH43_19 |
Gene ID: MGYG000003252_478_33
Type: CAZyme
Location: 44301 - 45725 (-)
Type: CAZyme
Location: 44301 - 45725 (-)
Gene ID: MGYG000003252_478_34
Type: TF
Location: 45931 - 50253 (+)
Type: TF
Location: 45931 - 50253 (+)
Gene ID: MGYG000003252_478_35
Type:
Location: 50163 - 50573 (-)
Type:
Location: 50163 - 50573 (-)
Gene ID: MGYG000003252_478_36
Type: CAZyme
Location: 50642 - 52207 (-)
Type: CAZyme
Location: 50642 - 52207 (-)
Gene ID: MGYG000003252_478_37
Type: pfam
Location: 52438 - 54090 (+)
Type: pfam
Location: 52438 - 54090 (+)
Gene ID: MGYG000003252_478_38
Type:
Location: 54181 - 54957 (+)
Type:
Location: 54181 - 54957 (+)
Gene ID: MGYG000003252_478_39
Type: TC
Location: 55090 - 58155 (+)
Type: TC
Location: 55090 - 58155 (+)
Gene ID: MGYG000003252_478_40
Type: pfam
Location: 58192 - 59718 (+)
Type: pfam
Location: 58192 - 59718 (+)
Gene ID: MGYG000003252_478_41
Type: CAZyme
Location: 59733 - 61703 (+)
Type: CAZyme
Location: 59733 - 61703 (+)
Gene ID: MGYG000003252_478_42
Type: CAZyme
Location: 61731 - 63356 (+)
Type: CAZyme
Location: 61731 - 63356 (+)
Gene ID: MGYG000003252_478_43
Type: CAZyme
Location: 63388 - 64590 (+)
Type: CAZyme
Location: 63388 - 64590 (+)
Gene ID: MGYG000003252_478_44
Type: CAZyme
Location: 64580 - 65794 (+)
Type: CAZyme
Location: 64580 - 65794 (+)
Gene ID: MGYG000003252_478_45
Type: CAZyme
Location: 65799 - 68360 (+)
Type: CAZyme
Location: 65799 - 68360 (+)
Gene ID: MGYG000003252_478_46
Type: CAZyme
Location: 68380 - 70761 (+)
Type: CAZyme
Location: 68380 - 70761 (+)
Gene ID: MGYG000003252_478_47
Type: CAZyme
Location: 70758 - 71837 (+)
Type: CAZyme
Location: 70758 - 71837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.