Cluster: MGYG000003252_CGC101
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_02229
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_397 | MGYG000003252_397_26 | 45821 | 46264 | + | 1.E.14.1.13 |
| TC | MGYG000003252_397 | MGYG000003252_397_27 | 46261 | 46956 | + | 2.A.122.1.1 |
| pfam | MGYG000003252_397 | MGYG000003252_397_28 | 47013 | 47930 | + | LPG_synthase_C |
| pfam | MGYG000003252_397 | MGYG000003252_397_29 | 47944 | 48960 | + | Acetyltransf_1 | Acetyltransf_9 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_30 | 48969 | 50102 | - | GH105 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_31 | 50107 | 51402 | - | PL42 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_32 | 51417 | 52439 | - | GH43_24 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_33 | 52468 | 53724 | - | GH154 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_34 | 53848 | 55788 | - | GH16_3 | GH43_24 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_35 | 55832 | 57316 | - | GH16_3 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_36 | 57335 | 58228 | - | CBM32 |
| pfam | MGYG000003252_397 | MGYG000003252_397_37 | 58256 | 59893 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_397 | MGYG000003252_397_38 | 59922 | 62936 | - | 1.B.14.6.1 |
| pfam | MGYG000003252_397 | MGYG000003252_397_39 | 62969 | 64897 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_397 | MGYG000003252_397_40 | 64916 | 68044 | - | 1.B.14.6.1 |
Gene ID: MGYG000003252_397_26
Type: TC
Location: 45821 - 46264 (+)
Type: TC
Location: 45821 - 46264 (+)
Gene ID: MGYG000003252_397_27
Type: TC
Location: 46261 - 46956 (+)
Type: TC
Location: 46261 - 46956 (+)
Gene ID: MGYG000003252_397_28
Type: pfam
Location: 47013 - 47930 (+)
Type: pfam
Location: 47013 - 47930 (+)
Gene ID: MGYG000003252_397_29
Type: pfam
Location: 47944 - 48960 (+)
Type: pfam
Location: 47944 - 48960 (+)
Gene ID: MGYG000003252_397_30
Type: CAZyme
Location: 48969 - 50102 (-)
Type: CAZyme
Location: 48969 - 50102 (-)
Gene ID: MGYG000003252_397_31
Type: CAZyme
Location: 50107 - 51402 (-)
Type: CAZyme
Location: 50107 - 51402 (-)
Gene ID: MGYG000003252_397_32
Type: CAZyme
Location: 51417 - 52439 (-)
Type: CAZyme
Location: 51417 - 52439 (-)
Gene ID: MGYG000003252_397_33
Type: CAZyme
Location: 52468 - 53724 (-)
Type: CAZyme
Location: 52468 - 53724 (-)
Gene ID: MGYG000003252_397_34
Type: CAZyme
Location: 53848 - 55788 (-)
Type: CAZyme
Location: 53848 - 55788 (-)
Gene ID: MGYG000003252_397_35
Type: CAZyme
Location: 55832 - 57316 (-)
Type: CAZyme
Location: 55832 - 57316 (-)
Gene ID: MGYG000003252_397_36
Type: CAZyme
Location: 57335 - 58228 (-)
Type: CAZyme
Location: 57335 - 58228 (-)
Gene ID: MGYG000003252_397_37
Type: pfam
Location: 58256 - 59893 (-)
Type: pfam
Location: 58256 - 59893 (-)
Gene ID: MGYG000003252_397_38
Type: TC
Location: 59922 - 62936 (-)
Type: TC
Location: 59922 - 62936 (-)
Gene ID: MGYG000003252_397_39
Type: pfam
Location: 62969 - 64897 (-)
Type: pfam
Location: 62969 - 64897 (-)
Gene ID: MGYG000003252_397_40
Type: TC
Location: 64916 - 68044 (-)
Type: TC
Location: 64916 - 68044 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_397_36 | vegan > omnivore | 1.23424 | 0.00574 |
| MGYG000003252_397_37 | vegan > omnivore | 1.20864 | 0.00574 |
| MGYG000003252_397_38 | vegan > omnivore | 1.52112 | 0.00574 |
| MGYG000003252_397_39 | vegan > omnivore | 1.47899 | 0.00574 |
| MGYG000003252_397_40 | vegan > omnivore | 1.08308 | 0.00574 |