Cluster: MGYG000003252_CGC100
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_01888
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003252_397 | MGYG000003252_397_18 | 30341 | 33646 | - | 1.B.14.6.1 |
| TF | MGYG000003252_397 | MGYG000003252_397_19 | 34011 | 37943 | + | HTH_AraC |
| pfam | MGYG000003252_397 | MGYG000003252_397_20 | 37958 | 38653 | - | RadC | UPF0758_N |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_21 | 38800 | 40797 | + | GH20 |
| CAZyme | MGYG000003252_397 | MGYG000003252_397_22 | 40963 | 41952 | - | GT2 |
Gene ID: MGYG000003252_397_18
Type: TC
Location: 30341 - 33646 (-)
Type: TC
Location: 30341 - 33646 (-)
Gene ID: MGYG000003252_397_19
Type: TF
Location: 34011 - 37943 (+)
Type: TF
Location: 34011 - 37943 (+)
Gene ID: MGYG000003252_397_20
Type: pfam
Location: 37958 - 38653 (-)
Type: pfam
Location: 37958 - 38653 (-)
Gene ID: MGYG000003252_397_21
Type: CAZyme
Location: 38800 - 40797 (+)
Type: CAZyme
Location: 38800 - 40797 (+)
Gene ID: MGYG000003252_397_22
Type: CAZyme
Location: 40963 - 41952 (-)
Type: CAZyme
Location: 40963 - 41952 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_397_18 | vegan > omnivore | 1.72871 | 0.00574 |
| MGYG000003252_397_18 | vegetarian > omnivore | 1.94929 | 0.01161 |