Cluster: MGYG000003236_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003236
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003236_11 | MGYG000003236_11_15 | 16422 | 17975 | - | 2.A.66.1.40 |
| pfam | MGYG000003236_11 | MGYG000003236_11_16 | 17972 | 19513 | - | Wzy_C |
| CAZyme | MGYG000003236_11 | MGYG000003236_11_17 | 19583 | 20689 | - | GT4 |
| pfam | MGYG000003236_11 | MGYG000003236_11_18 | 20702 | 21097 | - | CTP_transf_like |
| pfam | MGYG000003236_11 | MGYG000003236_11_19 | 21094 | 21924 | - | LicD |
| CAZyme | MGYG000003236_11 | MGYG000003236_11_20 | 21940 | 23124 | - | GT4 |
| pfam | MGYG000003236_11 | MGYG000003236_11_21 | 23209 | 23712 | - | VanZ |
| CAZyme | MGYG000003236_11 | MGYG000003236_11_22 | 23706 | 24953 | - | GT4 |
| TC | MGYG000003236_11 | MGYG000003236_11_23 | 25460 | 27202 | - | 3.D.1.6.3 |
| TC | MGYG000003236_11 | MGYG000003236_11_24 | 27221 | 29008 | - | 3.D.1.5.1 |
| NULL(UNKNOWN) | MGYG000003236_11 | MGYG000003236_11_25 | 29028 | 29399 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003236_11 | MGYG000003236_11_26 | 29411 | 29995 | - | HATPase_c |
| TC | MGYG000003236_11 | MGYG000003236_11_27 | 29999 | 30496 | - | 3.D.1.5.1 |
Gene ID: MGYG000003236_11_15
Type: TC
Location: 16422 - 17975 (-)
Type: TC
Location: 16422 - 17975 (-)
Gene ID: MGYG000003236_11_16
Type: pfam
Location: 17972 - 19513 (-)
Type: pfam
Location: 17972 - 19513 (-)
Gene ID: MGYG000003236_11_17
Type: CAZyme
Location: 19583 - 20689 (-)
Type: CAZyme
Location: 19583 - 20689 (-)
Gene ID: MGYG000003236_11_18
Type: pfam
Location: 20702 - 21097 (-)
Type: pfam
Location: 20702 - 21097 (-)
Gene ID: MGYG000003236_11_19
Type: pfam
Location: 21094 - 21924 (-)
Type: pfam
Location: 21094 - 21924 (-)
Gene ID: MGYG000003236_11_20
Type: CAZyme
Location: 21940 - 23124 (-)
Type: CAZyme
Location: 21940 - 23124 (-)
Gene ID: MGYG000003236_11_21
Type: pfam
Location: 23209 - 23712 (-)
Type: pfam
Location: 23209 - 23712 (-)
Gene ID: MGYG000003236_11_22
Type: CAZyme
Location: 23706 - 24953 (-)
Type: CAZyme
Location: 23706 - 24953 (-)
Gene ID: MGYG000003236_11_23
Type: TC
Location: 25460 - 27202 (-)
Type: TC
Location: 25460 - 27202 (-)
Gene ID: MGYG000003236_11_24
Type: TC
Location: 27221 - 29008 (-)
Type: TC
Location: 27221 - 29008 (-)
Gene ID: MGYG000003236_11_25
Type:
Location: 29028 - 29399 (-)
Type:
Location: 29028 - 29399 (-)
Gene ID: MGYG000003236_11_26
Type: STP
Location: 29411 - 29995 (-)
Type: STP
Location: 29411 - 29995 (-)
Gene ID: MGYG000003236_11_27
Type: TC
Location: 29999 - 30496 (-)
Type: TC
Location: 29999 - 30496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.