Cluster: MGYG000003236_CGC24
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003236
- CGC Family ID: CGCFAM_02467
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003236_96 | MGYG000003236_96_2 | 1433 | 3841 | + | GH31_7 |
| CAZyme | MGYG000003236_96 | MGYG000003236_96_3 | 3856 | 5679 | + | GH125 |
| CAZyme | MGYG000003236_96 | MGYG000003236_96_4 | 5711 | 7909 | + | GH65 |
| STP | MGYG000003236_96 | MGYG000003236_96_5 | 8040 | 9524 | + | SBP_bac_1 |
| STP | MGYG000003236_96 | MGYG000003236_96_6 | 9678 | 12629 | + | SBP_bac_1 |
| TC | MGYG000003236_96 | MGYG000003236_96_7 | 12622 | 13575 | + | 3.A.1.1.34 |
| TC | MGYG000003236_96 | MGYG000003236_96_8 | 13588 | 14478 | + | 3.A.1.1.46 |
| pfam | MGYG000003236_96 | MGYG000003236_96_9 | 14560 | 16626 | + | Yip1 |
| pfam | MGYG000003236_96 | MGYG000003236_96_10 | 16613 | 18892 | + | DUF5696 |
| TC | MGYG000003236_96 | MGYG000003236_96_11 | 18924 | 19850 | + | 3.A.1.1.11 |
| TC | MGYG000003236_96 | MGYG000003236_96_12 | 19807 | 20772 | + | 3.A.1.1.26 |
| CAZyme | MGYG000003236_96 | MGYG000003236_96_13 | 20936 | 23683 | + | GH31_7 |
| pfam | MGYG000003236_96 | MGYG000003236_96_14 | 23722 | 24354 | + | Hydrolase | HAD_2 |
| CAZyme | MGYG000003236_96 | MGYG000003236_96_15 | 24819 | 28112 | + | CBM35 | GH31_7 |
| CAZyme | MGYG000003236_96 | MGYG000003236_96_16 | 28296 | 32141 | + | CBM35 | CBM35 | CBM61 | GH31_10 |
Gene ID: MGYG000003236_96_2
Type: CAZyme
Location: 1433 - 3841 (+)
Type: CAZyme
Location: 1433 - 3841 (+)
Gene ID: MGYG000003236_96_3
Type: CAZyme
Location: 3856 - 5679 (+)
Type: CAZyme
Location: 3856 - 5679 (+)
Gene ID: MGYG000003236_96_4
Type: CAZyme
Location: 5711 - 7909 (+)
Type: CAZyme
Location: 5711 - 7909 (+)
Gene ID: MGYG000003236_96_5
Type: STP
Location: 8040 - 9524 (+)
Type: STP
Location: 8040 - 9524 (+)
Gene ID: MGYG000003236_96_6
Type: STP
Location: 9678 - 12629 (+)
Type: STP
Location: 9678 - 12629 (+)
Gene ID: MGYG000003236_96_7
Type: TC
Location: 12622 - 13575 (+)
Type: TC
Location: 12622 - 13575 (+)
Gene ID: MGYG000003236_96_8
Type: TC
Location: 13588 - 14478 (+)
Type: TC
Location: 13588 - 14478 (+)
Gene ID: MGYG000003236_96_9
Type: pfam
Location: 14560 - 16626 (+)
Type: pfam
Location: 14560 - 16626 (+)
Gene ID: MGYG000003236_96_10
Type: pfam
Location: 16613 - 18892 (+)
Type: pfam
Location: 16613 - 18892 (+)
Gene ID: MGYG000003236_96_11
Type: TC
Location: 18924 - 19850 (+)
Type: TC
Location: 18924 - 19850 (+)
Gene ID: MGYG000003236_96_12
Type: TC
Location: 19807 - 20772 (+)
Type: TC
Location: 19807 - 20772 (+)
Gene ID: MGYG000003236_96_13
Type: CAZyme
Location: 20936 - 23683 (+)
Type: CAZyme
Location: 20936 - 23683 (+)
Gene ID: MGYG000003236_96_14
Type: pfam
Location: 23722 - 24354 (+)
Type: pfam
Location: 23722 - 24354 (+)
Gene ID: MGYG000003236_96_15
Type: CAZyme
Location: 24819 - 28112 (+)
Type: CAZyme
Location: 24819 - 28112 (+)
Gene ID: MGYG000003236_96_16
Type: CAZyme
Location: 28296 - 32141 (+)
Type: CAZyme
Location: 28296 - 32141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.