Cluster: MGYG000003236_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003236
- CGC Family ID: CGCFAM_00242
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003236_87 | MGYG000003236_87_15 | 14930 | 16279 | + | 2.A.85.4.3 |
| TF | MGYG000003236_87 | MGYG000003236_87_16 | 16426 | 17298 | - | HTH_AraC |
| STP | MGYG000003236_87 | MGYG000003236_87_17 | 17717 | 19033 | + | SBP_bac_1 |
| TC | MGYG000003236_87 | MGYG000003236_87_18 | 19249 | 20145 | + | 3.A.1.1.20 |
| TC | MGYG000003236_87 | MGYG000003236_87_19 | 20159 | 21031 | + | 3.A.1.1.25 |
| pfam | MGYG000003236_87 | MGYG000003236_87_20 | 21050 | 21277 | + | DUF6903 |
| CAZyme | MGYG000003236_87 | MGYG000003236_87_21 | 21311 | 22195 | + | GH112 |
Gene ID: MGYG000003236_87_15
Type: TC
Location: 14930 - 16279 (+)
Type: TC
Location: 14930 - 16279 (+)
Gene ID: MGYG000003236_87_16
Type: TF
Location: 16426 - 17298 (-)
Type: TF
Location: 16426 - 17298 (-)
Gene ID: MGYG000003236_87_17
Type: STP
Location: 17717 - 19033 (+)
Type: STP
Location: 17717 - 19033 (+)
Gene ID: MGYG000003236_87_18
Type: TC
Location: 19249 - 20145 (+)
Type: TC
Location: 19249 - 20145 (+)
Gene ID: MGYG000003236_87_19
Type: TC
Location: 20159 - 21031 (+)
Type: TC
Location: 20159 - 21031 (+)
Gene ID: MGYG000003236_87_20
Type: pfam
Location: 21050 - 21277 (+)
Type: pfam
Location: 21050 - 21277 (+)
Gene ID: MGYG000003236_87_21
Type: CAZyme
Location: 21311 - 22195 (+)
Type: CAZyme
Location: 21311 - 22195 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.