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Cluster: MGYG000003236_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003236_78 MGYG000003236_78_12 12792 14615 - GH76
pfam MGYG000003236_78 MGYG000003236_78_13 14618 16444 - Glyco_hydro_76
CAZyme MGYG000003236_78 MGYG000003236_78_14 16496 19666 - GH38
TC MGYG000003236_78 MGYG000003236_78_15 19715 20788 - 3.A.1.1.20
TC MGYG000003236_78 MGYG000003236_78_16 20788 21756 - 3.A.1.1.11
pfam MGYG000003236_78 MGYG000003236_78_17 21827 24088 - DUF5696
NULL(UNKNOWN) MGYG000003236_78 MGYG000003236_78_18 24111 26234 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003236_78 MGYG000003236_78_19 26248 27174 - 3.A.1.1.39
TC MGYG000003236_78 MGYG000003236_78_20 27211 28155 - 3.A.1.1.34
Gene ID: MGYG000003236_78_12
Type: CAZyme
Location: 12792 - 14615 (-)
Gene ID: MGYG000003236_78_13
Type: pfam
Location: 14618 - 16444 (-)
Gene ID: MGYG000003236_78_14
Type: CAZyme
Location: 16496 - 19666 (-)
Gene ID: MGYG000003236_78_15
Type: TC
Location: 19715 - 20788 (-)
Gene ID: MGYG000003236_78_16
Type: TC
Location: 20788 - 21756 (-)
Gene ID: MGYG000003236_78_17
Type: pfam
Location: 21827 - 24088 (-)
Gene ID: MGYG000003236_78_18
Type:
Location: 24111 - 26234 (-)
Gene ID: MGYG000003236_78_19
Type: TC
Location: 26248 - 27174 (-)
Gene ID: MGYG000003236_78_20
Type: TC
Location: 27211 - 28155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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