Cluster: MGYG000003236_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003236
- CGC Family ID: CGCFAM_00026
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003236_10 | MGYG000003236_10_18 | 19202 | 20167 | + | 3.A.1.1.10 |
| TC | MGYG000003236_10 | MGYG000003236_10_19 | 20200 | 21120 | + | 3.A.1.1.29 |
| STP | MGYG000003236_10 | MGYG000003236_10_20 | 21166 | 22839 | + | SBP_bac_1 |
| pfam | MGYG000003236_10 | MGYG000003236_10_21 | 23042 | 24244 | + | SDH_alpha | SDH_beta |
| CAZyme | MGYG000003236_10 | MGYG000003236_10_22 | 24350 | 27439 | + | GH2 |
Gene ID: MGYG000003236_10_18
Type: TC
Location: 19202 - 20167 (+)
Type: TC
Location: 19202 - 20167 (+)
Gene ID: MGYG000003236_10_19
Type: TC
Location: 20200 - 21120 (+)
Type: TC
Location: 20200 - 21120 (+)
Gene ID: MGYG000003236_10_20
Type: STP
Location: 21166 - 22839 (+)
Type: STP
Location: 21166 - 22839 (+)
Gene ID: MGYG000003236_10_21
Type: pfam
Location: 23042 - 24244 (+)
Type: pfam
Location: 23042 - 24244 (+)
Gene ID: MGYG000003236_10_22
Type: CAZyme
Location: 24350 - 27439 (+)
Type: CAZyme
Location: 24350 - 27439 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.