Cluster: MGYG000003236_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003236
- CGC Family ID: CGCFAM_06344
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003236_60 | MGYG000003236_60_6 | 6792 | 8576 | - | 3.A.1.106.3 |
| peptidase | MGYG000003236_60 | MGYG000003236_60_7 | 8720 | 9610 | - | S12.UPW |
| CAZyme | MGYG000003236_60 | MGYG000003236_60_8 | 9658 | 11577 | - | GH13_39 |
| NULL(UNKNOWN) | MGYG000003236_60 | MGYG000003236_60_9 | 11977 | 12246 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003236_60 | MGYG000003236_60_10 | 12299 | 13225 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003236_60 | MGYG000003236_60_11 | 13682 | 15241 | + | 2.A.21.2.3 |
Gene ID: MGYG000003236_60_6
Type: TC
Location: 6792 - 8576 (-)
Type: TC
Location: 6792 - 8576 (-)
Gene ID: MGYG000003236_60_7
Type: peptidase
Location: 8720 - 9610 (-)
Type: peptidase
Location: 8720 - 9610 (-)
Gene ID: MGYG000003236_60_8
Type: CAZyme
Location: 9658 - 11577 (-)
Type: CAZyme
Location: 9658 - 11577 (-)
Gene ID: MGYG000003236_60_9
Type:
Location: 11977 - 12246 (-)
Type:
Location: 11977 - 12246 (-)
Gene ID: MGYG000003236_60_10
Type: TF
Location: 12299 - 13225 (-)
Type: TF
Location: 12299 - 13225 (-)
Gene ID: MGYG000003236_60_11
Type: TC
Location: 13682 - 15241 (+)
Type: TC
Location: 13682 - 15241 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Avimonas
Species
Avimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.