dbCAN Logo

Cluster: MGYG000003234_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003234_61 MGYG000003234_61_16 17901 18239 - 4.A.3.1.2
TF MGYG000003234_61 MGYG000003234_61_17 18454 19488 - LacI
TC MGYG000003234_61 MGYG000003234_61_18 19816 21591 + 4.A.3.1.1
CAZyme MGYG000003234_61 MGYG000003234_61_19 21658 23097 + GH1
TF MGYG000003234_61 MGYG000003234_61_20 23375 24412 - LacI
CAZyme MGYG000003234_61 MGYG000003234_61_21 24754 26196 + GH1
TC MGYG000003234_61 MGYG000003234_61_22 26373 28133 + 4.A.3.1.1
TF MGYG000003234_61 MGYG000003234_61_23 28463 29464 - LacI
TC MGYG000003234_61 MGYG000003234_61_24 29750 31528 + 4.A.3.1.1
CAZyme MGYG000003234_61 MGYG000003234_61_25 31604 33025 + GH1
Gene ID: MGYG000003234_61_16
Type: TC
Location: 17901 - 18239 (-)
Gene ID: MGYG000003234_61_17
Type: TF
Location: 18454 - 19488 (-)
Gene ID: MGYG000003234_61_18
Type: TC
Location: 19816 - 21591 (+)
Gene ID: MGYG000003234_61_19
Type: CAZyme
Location: 21658 - 23097 (+)
Gene ID: MGYG000003234_61_20
Type: TF
Location: 23375 - 24412 (-)
Gene ID: MGYG000003234_61_21
Type: CAZyme
Location: 24754 - 26196 (+)
Gene ID: MGYG000003234_61_22
Type: TC
Location: 26373 - 28133 (+)
Gene ID: MGYG000003234_61_23
Type: TF
Location: 28463 - 29464 (-)
Gene ID: MGYG000003234_61_24
Type: TC
Location: 29750 - 31528 (+)
Gene ID: MGYG000003234_61_25
Type: CAZyme
Location: 31604 - 33025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003234_61_20 vegetarian > omnivore 1.03696 0.01287

🧭 Explore Read Mapping of CGC

← Back to Cluster List