Cluster: MGYG000003234_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003234
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003234_31 | MGYG000003234_31_8 | 6986 | 8101 | - | GT28 |
| TC | MGYG000003234_31 | MGYG000003234_31_9 | 8091 | 9584 | - | 2.A.103.1.1 |
| pfam | MGYG000003234_31 | MGYG000003234_31_10 | 9621 | 11027 | - | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000003234_31 | MGYG000003234_31_11 | 11037 | 12056 | - | 9.B.146.1.6 |
Gene ID: MGYG000003234_31_8
Type: CAZyme
Location: 6986 - 8101 (-)
Type: CAZyme
Location: 6986 - 8101 (-)
Gene ID: MGYG000003234_31_9
Type: TC
Location: 8091 - 9584 (-)
Type: TC
Location: 8091 - 9584 (-)
Gene ID: MGYG000003234_31_10
Type: pfam
Location: 9621 - 11027 (-)
Type: pfam
Location: 9621 - 11027 (-)
Gene ID: MGYG000003234_31_11
Type: TC
Location: 11037 - 12056 (-)
Type: TC
Location: 11037 - 12056 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900761155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.