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Cluster: MGYG000003234_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003234_25 MGYG000003234_25_10 11302 12678 - GH13_20
TC MGYG000003234_25 MGYG000003234_25_11 12832 14028 - 2.A.1.2.18
TC MGYG000003234_25 MGYG000003234_25_12 14150 16510 - 9.A.8.1.6
peptidase MGYG000003234_25 MGYG000003234_25_13 16984 17883 - S09.UPW
TC MGYG000003234_25 MGYG000003234_25_14 18127 18690 + 4.A.1.2.6
pfam MGYG000003234_25 MGYG000003234_25_15 18872 20275 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) MGYG000003234_25 MGYG000003234_25_16 20534 21319 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003234_25 MGYG000003234_25_17 21480 22460 + 3.A.1.34.1
TC MGYG000003234_25 MGYG000003234_25_18 22665 23588 + 3.A.1.34.1
TC MGYG000003234_25 MGYG000003234_25_19 23581 24375 + 3.A.1.34.1
pfam MGYG000003234_25 MGYG000003234_25_20 24533 26560 + Metallophos | 5_nucleotid_C
TC MGYG000003234_25 MGYG000003234_25_21 26689 27399 + 1.A.23.4.10
Gene ID: MGYG000003234_25_10
Type: CAZyme
Location: 11302 - 12678 (-)
Gene ID: MGYG000003234_25_11
Type: TC
Location: 12832 - 14028 (-)
Gene ID: MGYG000003234_25_12
Type: TC
Location: 14150 - 16510 (-)
Gene ID: MGYG000003234_25_13
Type: peptidase
Location: 16984 - 17883 (-)
Gene ID: MGYG000003234_25_14
Type: TC
Location: 18127 - 18690 (+)
Gene ID: MGYG000003234_25_15
Type: pfam
Location: 18872 - 20275 (+)
Gene ID: MGYG000003234_25_16
Type:
Location: 20534 - 21319 (+)
Gene ID: MGYG000003234_25_17
Type: TC
Location: 21480 - 22460 (+)
Gene ID: MGYG000003234_25_18
Type: TC
Location: 22665 - 23588 (+)
Gene ID: MGYG000003234_25_19
Type: TC
Location: 23581 - 24375 (+)
Gene ID: MGYG000003234_25_20
Type: pfam
Location: 24533 - 26560 (+)
Gene ID: MGYG000003234_25_21
Type: TC
Location: 26689 - 27399 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003234_25_20 vegan > omnivore 1.78676 0.00701
MGYG000003234_25_20 vegetarian > omnivore 1.34423 0.01287

🧭 Explore Read Mapping of CGC

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