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Cluster: MGYG000003234_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003234_22 MGYG000003234_22_1 124 1293 - CE9
STP MGYG000003234_22 MGYG000003234_22_2 1412 2578 - SIS | SIS
TF MGYG000003234_22 MGYG000003234_22_3 2693 3424 - GntR
TC MGYG000003234_22 MGYG000003234_22_4 3610 4692 - 4.A.6.1.4
TC MGYG000003234_22 MGYG000003234_22_5 4682 5482 - 4.A.6.1.4
TC MGYG000003234_22 MGYG000003234_22_6 5573 6055 - 4.A.6.1.4
pfam MGYG000003234_22 MGYG000003234_22_7 6092 6373 - YajC
TC MGYG000003234_22 MGYG000003234_22_8 6373 6816 - 4.A.6.1.16
Gene ID: MGYG000003234_22_1
Type: CAZyme
Location: 124 - 1293 (-)
Gene ID: MGYG000003234_22_2
Type: STP
Location: 1412 - 2578 (-)
Gene ID: MGYG000003234_22_3
Type: TF
Location: 2693 - 3424 (-)
Gene ID: MGYG000003234_22_4
Type: TC
Location: 3610 - 4692 (-)
Gene ID: MGYG000003234_22_5
Type: TC
Location: 4682 - 5482 (-)
Gene ID: MGYG000003234_22_6
Type: TC
Location: 5573 - 6055 (-)
Gene ID: MGYG000003234_22_7
Type: pfam
Location: 6092 - 6373 (-)
Gene ID: MGYG000003234_22_8
Type: TC
Location: 6373 - 6816 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003234_22_7 vegan > omnivore 1.01111 0.00701

🧭 Explore Read Mapping of CGC

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