Cluster: MGYG000003225_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003225
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003225_35 | MGYG000003225_35_64 | 82652 | 84979 | - | 9.A.8.1.6 |
| TC | MGYG000003225_35 | MGYG000003225_35_65 | 85103 | 85324 | - | 9.A.8.1.6 |
| STP | MGYG000003225_35 | MGYG000003225_35_66 | 85364 | 85606 | - | FeoA |
| STP | MGYG000003225_35 | MGYG000003225_35_67 | 85795 | 86043 | - | PTS-HPr |
| TC | MGYG000003225_35 | MGYG000003225_35_68 | 86465 | 87928 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000003225_35 | MGYG000003225_35_69 | 88082 | 88537 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003225_35 | MGYG000003225_35_70 | 88541 | 91549 | - | GH2 |
Gene ID: MGYG000003225_35_64
Type: TC
Location: 82652 - 84979 (-)
Type: TC
Location: 82652 - 84979 (-)
Gene ID: MGYG000003225_35_65
Type: TC
Location: 85103 - 85324 (-)
Type: TC
Location: 85103 - 85324 (-)
Gene ID: MGYG000003225_35_66
Type: STP
Location: 85364 - 85606 (-)
Type: STP
Location: 85364 - 85606 (-)
Gene ID: MGYG000003225_35_67
Type: STP
Location: 85795 - 86043 (-)
Type: STP
Location: 85795 - 86043 (-)
Gene ID: MGYG000003225_35_68
Type: TC
Location: 86465 - 87928 (-)
Type: TC
Location: 86465 - 87928 (-)
Gene ID: MGYG000003225_35_69
Type:
Location: 88082 - 88537 (-)
Type:
Location: 88082 - 88537 (-)
Gene ID: MGYG000003225_35_70
Type: CAZyme
Location: 88541 - 91549 (-)
Type: CAZyme
Location: 88541 - 91549 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900760905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.