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Cluster: MGYG000003225_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003225_3 MGYG000003225_3_5 4856 6025 - CE9
STP MGYG000003225_3 MGYG000003225_3_6 6143 7309 - SIS | SIS
TF MGYG000003225_3 MGYG000003225_3_7 7424 8155 - GntR
TC MGYG000003225_3 MGYG000003225_3_8 8340 9422 - 4.A.6.1.4
TC MGYG000003225_3 MGYG000003225_3_9 9412 10212 - 4.A.6.1.4
TC MGYG000003225_3 MGYG000003225_3_10 10303 10785 - 4.A.6.1.4
pfam MGYG000003225_3 MGYG000003225_3_11 10822 11103 - YajC
TC MGYG000003225_3 MGYG000003225_3_12 11103 11546 - 4.A.6.1.16
Gene ID: MGYG000003225_3_5
Type: CAZyme
Location: 4856 - 6025 (-)
Gene ID: MGYG000003225_3_6
Type: STP
Location: 6143 - 7309 (-)
Gene ID: MGYG000003225_3_7
Type: TF
Location: 7424 - 8155 (-)
Gene ID: MGYG000003225_3_8
Type: TC
Location: 8340 - 9422 (-)
Gene ID: MGYG000003225_3_9
Type: TC
Location: 9412 - 10212 (-)
Gene ID: MGYG000003225_3_10
Type: TC
Location: 10303 - 10785 (-)
Gene ID: MGYG000003225_3_11
Type: pfam
Location: 10822 - 11103 (-)
Gene ID: MGYG000003225_3_12
Type: TC
Location: 11103 - 11546 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003225_3_11 vegan > omnivore 1.05326 0.00566

🧭 Explore Read Mapping of CGC

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