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Cluster: MGYG000003213_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003213_73 MGYG000003213_73_9 8824 9267 + 4.A.6.1.16
pfam MGYG000003213_73 MGYG000003213_73_10 9267 9548 + YajC
TC MGYG000003213_73 MGYG000003213_73_11 9585 10067 + 4.A.6.1.4
TC MGYG000003213_73 MGYG000003213_73_12 10158 10958 + 4.A.6.1.4
TC MGYG000003213_73 MGYG000003213_73_13 10948 12030 + 4.A.6.1.4
TF MGYG000003213_73 MGYG000003213_73_14 12216 12947 + GntR
STP MGYG000003213_73 MGYG000003213_73_15 13062 14228 + SIS | SIS
CAZyme MGYG000003213_73 MGYG000003213_73_16 14346 15515 + CE9
Gene ID: MGYG000003213_73_9
Type: TC
Location: 8824 - 9267 (+)
Gene ID: MGYG000003213_73_10
Type: pfam
Location: 9267 - 9548 (+)
Gene ID: MGYG000003213_73_11
Type: TC
Location: 9585 - 10067 (+)
Gene ID: MGYG000003213_73_12
Type: TC
Location: 10158 - 10958 (+)
Gene ID: MGYG000003213_73_13
Type: TC
Location: 10948 - 12030 (+)
Gene ID: MGYG000003213_73_14
Type: TF
Location: 12216 - 12947 (+)
Gene ID: MGYG000003213_73_15
Type: STP
Location: 13062 - 14228 (+)
Gene ID: MGYG000003213_73_16
Type: CAZyme
Location: 14346 - 15515 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003213_73_10 vegan > omnivore 1.07084 0.00701

🧭 Explore Read Mapping of CGC

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