Cluster: MGYG000003208_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_03483
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_14 | MGYG000003208_14_168 | 170328 | 171965 | - | 3.A.15.4.1 |
| TC | MGYG000003208_14 | MGYG000003208_14_169 | 171970 | 173154 | - | 3.A.15.2.1 |
| CAZyme | MGYG000003208_14 | MGYG000003208_14_170 | 173151 | 173615 | - | GH23 |
| TC | MGYG000003208_14 | MGYG000003208_14_171 | 173623 | 174057 | - | 3.A.15.3.1 |
| CAZyme | MGYG000003208_14 | MGYG000003208_14_172 | 174251 | 175723 | - | AA10 | CBM73 |
Gene ID: MGYG000003208_14_168
Type: TC
Location: 170328 - 171965 (-)
Type: TC
Location: 170328 - 171965 (-)
Gene ID: MGYG000003208_14_169
Type: TC
Location: 171970 - 173154 (-)
Type: TC
Location: 171970 - 173154 (-)
Gene ID: MGYG000003208_14_170
Type: CAZyme
Location: 173151 - 173615 (-)
Type: CAZyme
Location: 173151 - 173615 (-)
Gene ID: MGYG000003208_14_171
Type: TC
Location: 173623 - 174057 (-)
Type: TC
Location: 173623 - 174057 (-)
Gene ID: MGYG000003208_14_172
Type: CAZyme
Location: 174251 - 175723 (-)
Type: CAZyme
Location: 174251 - 175723 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.