Cluster: MGYG000003208_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_03893
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_14 | MGYG000003208_14_112 | 108898 | 109752 | + | 1.A.16.4.1 |
| pfam | MGYG000003208_14 | MGYG000003208_14_113 | 109839 | 110225 | + | MAPEG |
| CAZyme | MGYG000003208_14 | MGYG000003208_14_114 | 110278 | 111453 | - | GH102 |
Gene ID: MGYG000003208_14_112
Type: TC
Location: 108898 - 109752 (+)
Type: TC
Location: 108898 - 109752 (+)
Gene ID: MGYG000003208_14_113
Type: pfam
Location: 109839 - 110225 (+)
Type: pfam
Location: 109839 - 110225 (+)
Gene ID: MGYG000003208_14_114
Type: CAZyme
Location: 110278 - 111453 (-)
Type: CAZyme
Location: 110278 - 111453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.