Cluster: MGYG000003208_CGC50
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_96 | MGYG000003208_96_61 | 67765 | 70131 | + | 1.B.33.1.3 |
| CAZyme | MGYG000003208_96 | MGYG000003208_96_62 | 70305 | 71126 | + | GT73 |
| TC | MGYG000003208_96 | MGYG000003208_96_63 | 71229 | 71516 | - | 8.A.79.1.3 |
| pfam | MGYG000003208_96 | MGYG000003208_96_64 | 71516 | 71638 | - | YbgT_YccB |
| TC | MGYG000003208_96 | MGYG000003208_96_65 | 71661 | 72797 | - | 3.D.4.3.2 |
| TC | MGYG000003208_96 | MGYG000003208_96_66 | 72790 | 74361 | - | 3.D.4.3.2 |
Gene ID: MGYG000003208_96_61
Type: TC
Location: 67765 - 70131 (+)
Type: TC
Location: 67765 - 70131 (+)
Gene ID: MGYG000003208_96_62
Type: CAZyme
Location: 70305 - 71126 (+)
Type: CAZyme
Location: 70305 - 71126 (+)
Gene ID: MGYG000003208_96_63
Type: TC
Location: 71229 - 71516 (-)
Type: TC
Location: 71229 - 71516 (-)
Gene ID: MGYG000003208_96_64
Type: pfam
Location: 71516 - 71638 (-)
Type: pfam
Location: 71516 - 71638 (-)
Gene ID: MGYG000003208_96_65
Type: TC
Location: 71661 - 72797 (-)
Type: TC
Location: 71661 - 72797 (-)
Gene ID: MGYG000003208_96_66
Type: TC
Location: 72790 - 74361 (-)
Type: TC
Location: 72790 - 74361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.