Cluster: MGYG000003208_CGC49
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_08921
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_96 | MGYG000003208_96_28 | 31643 | 32311 | - | 3.A.1.125.2 |
| NULL(UNKNOWN) | MGYG000003208_96 | MGYG000003208_96_29 | 32585 | 33259 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003208_96 | MGYG000003208_96_30 | 33449 | 35104 | + | GT83 |
| CAZyme | MGYG000003208_96 | MGYG000003208_96_31 | 35104 | 36627 | + | GT83 |
| TC | MGYG000003208_96 | MGYG000003208_96_32 | 36635 | 37561 | - | 3.A.1.2.19 |
Gene ID: MGYG000003208_96_28
Type: TC
Location: 31643 - 32311 (-)
Type: TC
Location: 31643 - 32311 (-)
Gene ID: MGYG000003208_96_29
Type:
Location: 32585 - 33259 (+)
Type:
Location: 32585 - 33259 (+)
Gene ID: MGYG000003208_96_30
Type: CAZyme
Location: 33449 - 35104 (+)
Type: CAZyme
Location: 33449 - 35104 (+)
Gene ID: MGYG000003208_96_31
Type: CAZyme
Location: 35104 - 36627 (+)
Type: CAZyme
Location: 35104 - 36627 (+)
Gene ID: MGYG000003208_96_32
Type: TC
Location: 36635 - 37561 (-)
Type: TC
Location: 36635 - 37561 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.