Cluster: MGYG000003208_CGC48
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_10351
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_95 | MGYG000003208_95_10 | 10699 | 11481 | - | 3.A.1.3.24 |
| TC | MGYG000003208_95 | MGYG000003208_95_11 | 11478 | 12140 | - | 3.A.1.3.16 |
| TC | MGYG000003208_95 | MGYG000003208_95_12 | 12152 | 12814 | - | 3.A.1.3.14 |
| TC | MGYG000003208_95 | MGYG000003208_95_13 | 12867 | 13715 | - | 3.A.1.3.26 |
| pfam | MGYG000003208_95 | MGYG000003208_95_14 | 14074 | 14406 | + | Thioredoxin |
| TC | MGYG000003208_95 | MGYG000003208_95_15 | 14789 | 15814 | - | 8.A.21.2.4 |
| pfam | MGYG000003208_95 | MGYG000003208_95_16 | 16009 | 16719 | + | His_Phos_1 | His_Phos_1 |
| pfam | MGYG000003208_95 | MGYG000003208_95_17 | 16776 | 17090 | + | SCP2 | Alkyl_sulf_C |
| CAZyme | MGYG000003208_95 | MGYG000003208_95_18 | 17233 | 19854 | - | GH63 |
Gene ID: MGYG000003208_95_10
Type: TC
Location: 10699 - 11481 (-)
Type: TC
Location: 10699 - 11481 (-)
Gene ID: MGYG000003208_95_11
Type: TC
Location: 11478 - 12140 (-)
Type: TC
Location: 11478 - 12140 (-)
Gene ID: MGYG000003208_95_12
Type: TC
Location: 12152 - 12814 (-)
Type: TC
Location: 12152 - 12814 (-)
Gene ID: MGYG000003208_95_13
Type: TC
Location: 12867 - 13715 (-)
Type: TC
Location: 12867 - 13715 (-)
Gene ID: MGYG000003208_95_14
Type: pfam
Location: 14074 - 14406 (+)
Type: pfam
Location: 14074 - 14406 (+)
Gene ID: MGYG000003208_95_15
Type: TC
Location: 14789 - 15814 (-)
Type: TC
Location: 14789 - 15814 (-)
Gene ID: MGYG000003208_95_16
Type: pfam
Location: 16009 - 16719 (+)
Type: pfam
Location: 16009 - 16719 (+)
Gene ID: MGYG000003208_95_17
Type: pfam
Location: 16776 - 17090 (+)
Type: pfam
Location: 16776 - 17090 (+)
Gene ID: MGYG000003208_95_18
Type: CAZyme
Location: 17233 - 19854 (-)
Type: CAZyme
Location: 17233 - 19854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.