Cluster: MGYG000003208_CGC46
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_86 | MGYG000003208_86_141 | 119314 | 121263 | - | 3.A.7.7.1 |
| TC | MGYG000003208_86 | MGYG000003208_86_142 | 121486 | 123108 | - | 2.A.1.6.8 |
| CAZyme | MGYG000003208_86 | MGYG000003208_86_143 | 123224 | 124891 | - | AA3_2 |
Gene ID: MGYG000003208_86_141
Type: TC
Location: 119314 - 121263 (-)
Type: TC
Location: 119314 - 121263 (-)
Gene ID: MGYG000003208_86_142
Type: TC
Location: 121486 - 123108 (-)
Type: TC
Location: 121486 - 123108 (-)
Gene ID: MGYG000003208_86_143
Type: CAZyme
Location: 123224 - 124891 (-)
Type: CAZyme
Location: 123224 - 124891 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.