Cluster: MGYG000003208_CGC44
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_01454
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003208_77 | MGYG000003208_77_13 | 11173 | 12099 | - | CE4 |
| TC | MGYG000003208_77 | MGYG000003208_77_14 | 12554 | 12907 | + | 9.B.35.1.2 |
| pfam | MGYG000003208_77 | MGYG000003208_77_15 | 13060 | 18255 | + | ToxA_N | ToxA_N |
| TC | MGYG000003208_77 | MGYG000003208_77_16 | 18328 | 19674 | - | 2.A.40.7.6 |
Gene ID: MGYG000003208_77_13
Type: CAZyme
Location: 11173 - 12099 (-)
Type: CAZyme
Location: 11173 - 12099 (-)
Gene ID: MGYG000003208_77_14
Type: TC
Location: 12554 - 12907 (+)
Type: TC
Location: 12554 - 12907 (+)
Gene ID: MGYG000003208_77_15
Type: pfam
Location: 13060 - 18255 (+)
Type: pfam
Location: 13060 - 18255 (+)
Gene ID: MGYG000003208_77_16
Type: TC
Location: 18328 - 19674 (-)
Type: TC
Location: 18328 - 19674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.