Cluster: MGYG000003208_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_07790
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_76 | MGYG000003208_76_10 | 9000 | 11159 | - | 1.B.14.1.6 |
| TC | MGYG000003208_76 | MGYG000003208_76_11 | 11344 | 13908 | - | 1.B.12.5.7 |
| STP | MGYG000003208_76 | MGYG000003208_76_12 | 14154 | 14915 | - | PIG-L |
| CAZyme | MGYG000003208_76 | MGYG000003208_76_13 | 15094 | 15753 | - | GT2 |
Gene ID: MGYG000003208_76_10
Type: TC
Location: 9000 - 11159 (-)
Type: TC
Location: 9000 - 11159 (-)
Gene ID: MGYG000003208_76_11
Type: TC
Location: 11344 - 13908 (-)
Type: TC
Location: 11344 - 13908 (-)
Gene ID: MGYG000003208_76_12
Type: STP
Location: 14154 - 14915 (-)
Type: STP
Location: 14154 - 14915 (-)
Gene ID: MGYG000003208_76_13
Type: CAZyme
Location: 15094 - 15753 (-)
Type: CAZyme
Location: 15094 - 15753 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.