Cluster: MGYG000003208_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003208_69 | MGYG000003208_69_2 | 210 | 3524 | - | GT41 |
| pfam | MGYG000003208_69 | MGYG000003208_69_3 | 3697 | 4749 | - | Flagellin_N | Flagellin_C |
| TC | MGYG000003208_69 | MGYG000003208_69_4 | 4991 | 5815 | + | 1.A.30.1.4 |
| TC | MGYG000003208_69 | MGYG000003208_69_5 | 5812 | 6600 | + | 1.A.30.1.4 |
| NULL(UNKNOWN) | MGYG000003208_69 | MGYG000003208_69_6 | 6685 | 7014 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003208_69 | MGYG000003208_69_7 | 7054 | 7689 | - | 2.A.76.1.10 |
Gene ID: MGYG000003208_69_2
Type: CAZyme
Location: 210 - 3524 (-)
Type: CAZyme
Location: 210 - 3524 (-)
Gene ID: MGYG000003208_69_3
Type: pfam
Location: 3697 - 4749 (-)
Type: pfam
Location: 3697 - 4749 (-)
Gene ID: MGYG000003208_69_4
Type: TC
Location: 4991 - 5815 (+)
Type: TC
Location: 4991 - 5815 (+)
Gene ID: MGYG000003208_69_5
Type: TC
Location: 5812 - 6600 (+)
Type: TC
Location: 5812 - 6600 (+)
Gene ID: MGYG000003208_69_6
Type:
Location: 6685 - 7014 (+)
Type:
Location: 6685 - 7014 (+)
Gene ID: MGYG000003208_69_7
Type: TC
Location: 7054 - 7689 (-)
Type: TC
Location: 7054 - 7689 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.