Cluster: MGYG000003208_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_13 | MGYG000003208_13_75 | 85376 | 87034 | - | 2.A.21.7.2 |
| TC | MGYG000003208_13 | MGYG000003208_13_76 | 87031 | 87342 | - | 9.B.136.1.1 |
| TC | MGYG000003208_13 | MGYG000003208_13_77 | 87587 | 88438 | - | 3.A.1.12.12 |
| CAZyme | MGYG000003208_13 | MGYG000003208_13_78 | 88770 | 90323 | + | GH17 |
Gene ID: MGYG000003208_13_75
Type: TC
Location: 85376 - 87034 (-)
Type: TC
Location: 85376 - 87034 (-)
Gene ID: MGYG000003208_13_76
Type: TC
Location: 87031 - 87342 (-)
Type: TC
Location: 87031 - 87342 (-)
Gene ID: MGYG000003208_13_77
Type: TC
Location: 87587 - 88438 (-)
Type: TC
Location: 87587 - 88438 (-)
Gene ID: MGYG000003208_13_78
Type: CAZyme
Location: 88770 - 90323 (+)
Type: CAZyme
Location: 88770 - 90323 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.