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Cluster: MGYG000003208_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003208_55 MGYG000003208_55_40 47190 48380 + 2.A.46.1.9
pfam MGYG000003208_55 MGYG000003208_55_41 48436 48780 - YggL_50S_bp
peptidase MGYG000003208_55 MGYG000003208_55_42 49018 50478 + S13.003
TC MGYG000003208_55 MGYG000003208_55_43 50486 52915 - 9.B.34.1.3
pfam MGYG000003208_55 MGYG000003208_55_44 53047 55311 - UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
pfam MGYG000003208_55 MGYG000003208_55_45 56183 57211 - DHO_dh
CAZyme MGYG000003208_55 MGYG000003208_55_46 57297 57758 - GH23
TF MGYG000003208_55 MGYG000003208_55_47 57751 58128 - Trans_reg_C
pfam MGYG000003208_55 MGYG000003208_55_48 58284 58508 - FliMN_C
TC MGYG000003208_55 MGYG000003208_55_49 58524 59969 - 1.B.22.3.2
TC MGYG000003208_55 MGYG000003208_55_50 60206 61432 + 3.A.1.16.4
STP MGYG000003208_55 MGYG000003208_55_51 61445 62020 + ANTAR | Response_reg
TC MGYG000003208_55 MGYG000003208_55_52 62230 63441 + 2.A.1.8.2
TC MGYG000003208_55 MGYG000003208_55_53 63441 65111 + 9.B.106.3.1
pfam MGYG000003208_55 MGYG000003208_55_54 65137 65880 + TP_methylase
TC MGYG000003208_55 MGYG000003208_55_55 65941 66918 - 1.B.6.1.2
Gene ID: MGYG000003208_55_40
Type: TC
Location: 47190 - 48380 (+)
Gene ID: MGYG000003208_55_41
Type: pfam
Location: 48436 - 48780 (-)
Gene ID: MGYG000003208_55_42
Type: peptidase
Location: 49018 - 50478 (+)
Gene ID: MGYG000003208_55_43
Type: TC
Location: 50486 - 52915 (-)
Gene ID: MGYG000003208_55_44
Type: pfam
Location: 53047 - 55311 (-)
Gene ID: MGYG000003208_55_45
Type: pfam
Location: 56183 - 57211 (-)
Gene ID: MGYG000003208_55_46
Type: CAZyme
Location: 57297 - 57758 (-)
Gene ID: MGYG000003208_55_47
Type: TF
Location: 57751 - 58128 (-)
Gene ID: MGYG000003208_55_48
Type: pfam
Location: 58284 - 58508 (-)
Gene ID: MGYG000003208_55_49
Type: TC
Location: 58524 - 59969 (-)
Gene ID: MGYG000003208_55_50
Type: TC
Location: 60206 - 61432 (+)
Gene ID: MGYG000003208_55_51
Type: STP
Location: 61445 - 62020 (+)
Gene ID: MGYG000003208_55_52
Type: TC
Location: 62230 - 63441 (+)
Gene ID: MGYG000003208_55_53
Type: TC
Location: 63441 - 65111 (+)
Gene ID: MGYG000003208_55_54
Type: pfam
Location: 65137 - 65880 (+)
Gene ID: MGYG000003208_55_55
Type: TC
Location: 65941 - 66918 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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