Cluster: MGYG000003208_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003208
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_37 | MGYG000003208_37_413 | 443468 | 445348 | + | 9.B.34.1.3 |
| TC | MGYG000003208_37 | MGYG000003208_37_414 | 445365 | 446351 | + | 5.B.3.1.1 |
| STP | MGYG000003208_37 | MGYG000003208_37_415 | 446362 | 448176 | + | HATPase_c |
| TC | MGYG000003208_37 | MGYG000003208_37_416 | 448173 | 449576 | + | 2.A.21.9.1 |
| pfam | MGYG000003208_37 | MGYG000003208_37_417 | 449762 | 451381 | + | Glu_synthase |
| CAZyme | MGYG000003208_37 | MGYG000003208_37_418 | 451429 | 453024 | - | GT83 |
| pfam | MGYG000003208_37 | MGYG000003208_37_419 | 453118 | 454641 | - | Glucos_trans_II |
| CAZyme | MGYG000003208_37 | MGYG000003208_37_420 | 454628 | 455596 | - | GT2 |
Gene ID: MGYG000003208_37_413
Type: TC
Location: 443468 - 445348 (+)
Type: TC
Location: 443468 - 445348 (+)
Gene ID: MGYG000003208_37_414
Type: TC
Location: 445365 - 446351 (+)
Type: TC
Location: 445365 - 446351 (+)
Gene ID: MGYG000003208_37_415
Type: STP
Location: 446362 - 448176 (+)
Type: STP
Location: 446362 - 448176 (+)
Gene ID: MGYG000003208_37_416
Type: TC
Location: 448173 - 449576 (+)
Type: TC
Location: 448173 - 449576 (+)
Gene ID: MGYG000003208_37_417
Type: pfam
Location: 449762 - 451381 (+)
Type: pfam
Location: 449762 - 451381 (+)
Gene ID: MGYG000003208_37_418
Type: CAZyme
Location: 451429 - 453024 (-)
Type: CAZyme
Location: 451429 - 453024 (-)
Gene ID: MGYG000003208_37_419
Type: pfam
Location: 453118 - 454641 (-)
Type: pfam
Location: 453118 - 454641 (-)
Gene ID: MGYG000003208_37_420
Type: CAZyme
Location: 454628 - 455596 (-)
Type: CAZyme
Location: 454628 - 455596 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.