Cluster: MGYG000003208_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_06343
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_37 | MGYG000003208_37_31 | 37964 | 38314 | - | 2.A.6.1.4 |
| TC | MGYG000003208_37 | MGYG000003208_37_32 | 38311 | 38640 | - | 2.A.6.1.3 |
| TC | MGYG000003208_37 | MGYG000003208_37_33 | 38603 | 39199 | - | 2.A.6.1.3 |
| NULL(UNKNOWN) | MGYG000003208_37 | MGYG000003208_37_34 | 39299 | 39526 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003208_37 | MGYG000003208_37_35 | 39872 | 40114 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003208_37 | MGYG000003208_37_36 | 40187 | 41131 | - | 9.B.62.1.2 |
| TC | MGYG000003208_37 | MGYG000003208_37_37 | 41135 | 41518 | - | 9.B.62.1.5 |
| CAZyme | MGYG000003208_37 | MGYG000003208_37_38 | 42113 | 43597 | - | AA1 |
Gene ID: MGYG000003208_37_31
Type: TC
Location: 37964 - 38314 (-)
Type: TC
Location: 37964 - 38314 (-)
Gene ID: MGYG000003208_37_32
Type: TC
Location: 38311 - 38640 (-)
Type: TC
Location: 38311 - 38640 (-)
Gene ID: MGYG000003208_37_33
Type: TC
Location: 38603 - 39199 (-)
Type: TC
Location: 38603 - 39199 (-)
Gene ID: MGYG000003208_37_34
Type:
Location: 39299 - 39526 (-)
Type:
Location: 39299 - 39526 (-)
Gene ID: MGYG000003208_37_35
Type:
Location: 39872 - 40114 (-)
Type:
Location: 39872 - 40114 (-)
Gene ID: MGYG000003208_37_36
Type: TC
Location: 40187 - 41131 (-)
Type: TC
Location: 40187 - 41131 (-)
Gene ID: MGYG000003208_37_37
Type: TC
Location: 41135 - 41518 (-)
Type: TC
Location: 41135 - 41518 (-)
Gene ID: MGYG000003208_37_38
Type: CAZyme
Location: 42113 - 43597 (-)
Type: CAZyme
Location: 42113 - 43597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.