Cluster: MGYG000003208_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- CGC Family ID: CGCFAM_08918
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003208_7 | MGYG000003208_7_105 | 126797 | 127909 | - | GT4 |
| pfam | MGYG000003208_7 | MGYG000003208_7_106 | 128191 | 129669 | + | DUF87 | HerA_C |
| pfam | MGYG000003208_7 | MGYG000003208_7_107 | 129674 | 130129 | - | DciA |
| TC | MGYG000003208_7 | MGYG000003208_7_108 | 130435 | 133170 | + | 3.A.5.1.1 |
Gene ID: MGYG000003208_7_105
Type: CAZyme
Location: 126797 - 127909 (-)
Type: CAZyme
Location: 126797 - 127909 (-)
Gene ID: MGYG000003208_7_106
Type: pfam
Location: 128191 - 129669 (+)
Type: pfam
Location: 128191 - 129669 (+)
Gene ID: MGYG000003208_7_107
Type: pfam
Location: 129674 - 130129 (-)
Type: pfam
Location: 129674 - 130129 (-)
Gene ID: MGYG000003208_7_108
Type: TC
Location: 130435 - 133170 (+)
Type: TC
Location: 130435 - 133170 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.