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Cluster: MGYG000003208_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003208_23 MGYG000003208_23_29 32367 34463 - 9.B.34.1.3
TC MGYG000003208_23 MGYG000003208_23_30 34682 36229 - 2.A.6.2.39
TC MGYG000003208_23 MGYG000003208_23_31 36226 39333 - 2.A.6.2.39
TC MGYG000003208_23 MGYG000003208_23_32 39330 42431 - 2.A.6.2.39
TC MGYG000003208_23 MGYG000003208_23_33 42428 43732 - 2.A.6.2.39
pfam MGYG000003208_23 MGYG000003208_23_34 43965 44465 - AhpC-TSA | Redoxin
CAZyme MGYG000003208_23 MGYG000003208_23_35 44626 45915 + GT4
TF MGYG000003208_23 MGYG000003208_23_36 45988 46893 + HTH_AraC | HTH_AraC
TC MGYG000003208_23 MGYG000003208_23_37 47215 48537 + 3.A.1.1.49
TC MGYG000003208_23 MGYG000003208_23_38 48632 49522 + 3.A.1.1.49
TC MGYG000003208_23 MGYG000003208_23_39 49533 50363 + 3.A.1.1.49
TC MGYG000003208_23 MGYG000003208_23_40 50385 51488 + 3.A.1.1.49
Gene ID: MGYG000003208_23_29
Type: TC
Location: 32367 - 34463 (-)
Gene ID: MGYG000003208_23_30
Type: TC
Location: 34682 - 36229 (-)
Gene ID: MGYG000003208_23_31
Type: TC
Location: 36226 - 39333 (-)
Gene ID: MGYG000003208_23_32
Type: TC
Location: 39330 - 42431 (-)
Gene ID: MGYG000003208_23_33
Type: TC
Location: 42428 - 43732 (-)
Gene ID: MGYG000003208_23_34
Type: pfam
Location: 43965 - 44465 (-)
Gene ID: MGYG000003208_23_35
Type: CAZyme
Location: 44626 - 45915 (+)
Gene ID: MGYG000003208_23_36
Type: TF
Location: 45988 - 46893 (+)
Gene ID: MGYG000003208_23_37
Type: TC
Location: 47215 - 48537 (+)
Gene ID: MGYG000003208_23_38
Type: TC
Location: 48632 - 49522 (+)
Gene ID: MGYG000003208_23_39
Type: TC
Location: 49533 - 50363 (+)
Gene ID: MGYG000003208_23_40
Type: TC
Location: 50385 - 51488 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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