Cluster: MGYG000003208_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003208
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003208_7 | MGYG000003208_7_14 | 25657 | 27351 | - | 4.A.1.1.15 |
| TC | MGYG000003208_7 | MGYG000003208_7_15 | 27378 | 29888 | - | 4.A.1.1.15 |
| STP | MGYG000003208_7 | MGYG000003208_7_16 | 29925 | 30947 | - | SIS | SIS |
| CAZyme | MGYG000003208_7 | MGYG000003208_7_17 | 30928 | 32034 | - | CE9 |
Gene ID: MGYG000003208_7_14
Type: TC
Location: 25657 - 27351 (-)
Type: TC
Location: 25657 - 27351 (-)
Gene ID: MGYG000003208_7_15
Type: TC
Location: 27378 - 29888 (-)
Type: TC
Location: 27378 - 29888 (-)
Gene ID: MGYG000003208_7_16
Type: STP
Location: 29925 - 30947 (-)
Type: STP
Location: 29925 - 30947 (-)
Gene ID: MGYG000003208_7_17
Type: CAZyme
Location: 30928 - 32034 (-)
Type: CAZyme
Location: 30928 - 32034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E extremaustralis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.