Cluster: MGYG000003205_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003205
- CGC Family ID: CGCFAM_09349
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003205_63 | MGYG000003205_63_60 | 62427 | 64178 | - | 2.A.58.2.2 |
| pfam | MGYG000003205_63 | MGYG000003205_63_61 | 64220 | 64897 | + | QueC |
| CAZyme | MGYG000003205_63 | MGYG000003205_63_62 | 64925 | 66094 | - | GH5_37 |
| TF | MGYG000003205_63 | MGYG000003205_63_63 | 66248 | 67282 | + | LacI |
| NULL(UNKNOWN) | MGYG000003205_63 | MGYG000003205_63_64 | 67294 | 69174 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003205_63 | MGYG000003205_63_65 | 69269 | 69751 | - | 3.D.1.8.1 |
Gene ID: MGYG000003205_63_60
Type: TC
Location: 62427 - 64178 (-)
Type: TC
Location: 62427 - 64178 (-)
Gene ID: MGYG000003205_63_61
Type: pfam
Location: 64220 - 64897 (+)
Type: pfam
Location: 64220 - 64897 (+)
Gene ID: MGYG000003205_63_62
Type: CAZyme
Location: 64925 - 66094 (-)
Type: CAZyme
Location: 64925 - 66094 (-)
Gene ID: MGYG000003205_63_63
Type: TF
Location: 66248 - 67282 (+)
Type: TF
Location: 66248 - 67282 (+)
Gene ID: MGYG000003205_63_64
Type:
Location: 67294 - 69174 (-)
Type:
Location: 67294 - 69174 (-)
Gene ID: MGYG000003205_63_65
Type: TC
Location: 69269 - 69751 (-)
Type: TC
Location: 69269 - 69751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900760055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.