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Cluster: MGYG000003205_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003205_56 MGYG000003205_56_18 19593 21164 - GH30_4
pfam MGYG000003205_56 MGYG000003205_56_19 21349 24612 + MGS | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C
NULL(UNKNOWN) MGYG000003205_56 MGYG000003205_56_20 24648 25043 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003205_56 MGYG000003205_56_21 25046 25789 + 3.A.1.27.4
pfam MGYG000003205_56 MGYG000003205_56_22 25789 27210 + SUFBD_core | SufBD_N
pfam MGYG000003205_56 MGYG000003205_56_23 27210 28370 + SUFBD_core
CAZyme MGYG000003205_56 MGYG000003205_56_24 28475 29356 - GH16_14
Gene ID: MGYG000003205_56_18
Type: CAZyme
Location: 19593 - 21164 (-)
Gene ID: MGYG000003205_56_19
Type: pfam
Location: 21349 - 24612 (+)
Gene ID: MGYG000003205_56_20
Type:
Location: 24648 - 25043 (+)
Gene ID: MGYG000003205_56_21
Type: TC
Location: 25046 - 25789 (+)
Gene ID: MGYG000003205_56_22
Type: pfam
Location: 25789 - 27210 (+)
Gene ID: MGYG000003205_56_23
Type: pfam
Location: 27210 - 28370 (+)
Gene ID: MGYG000003205_56_24
Type: CAZyme
Location: 28475 - 29356 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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