Cluster: MGYG000003196_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003196
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003196_3 | MGYG000003196_3_38 | 41921 | 43048 | + | GT76 |
| TC | MGYG000003196_3 | MGYG000003196_3_39 | 43045 | 43923 | - | 2.A.7.35.1 |
| STP | MGYG000003196_3 | MGYG000003196_3_40 | 44154 | 45419 | + | ACT |
| pfam | MGYG000003196_3 | MGYG000003196_3_41 | 45454 | 46485 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | MGYG000003196_3 | MGYG000003196_3_42 | 46596 | 47969 | - | 2.A.120.1.1 |
Gene ID: MGYG000003196_3_38
Type: CAZyme
Location: 41921 - 43048 (+)
Type: CAZyme
Location: 41921 - 43048 (+)
Gene ID: MGYG000003196_3_39
Type: TC
Location: 43045 - 43923 (-)
Type: TC
Location: 43045 - 43923 (-)
Gene ID: MGYG000003196_3_40
Type: STP
Location: 44154 - 45419 (+)
Type: STP
Location: 44154 - 45419 (+)
Gene ID: MGYG000003196_3_41
Type: pfam
Location: 45454 - 46485 (+)
Type: pfam
Location: 45454 - 46485 (+)
Gene ID: MGYG000003196_3_42
Type: TC
Location: 46596 - 47969 (-)
Type: TC
Location: 46596 - 47969 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp900539985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.