Cluster: MGYG000003196_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003196
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003196_34 | MGYG000003196_34_14 | 12115 | 13536 | + | 2.A.25.1.3 |
| pfam | MGYG000003196_34 | MGYG000003196_34_15 | 13547 | 13849 | + | CRCB |
| pfam | MGYG000003196_34 | MGYG000003196_34_16 | 13846 | 14205 | + | CRCB |
| CAZyme | MGYG000003196_34 | MGYG000003196_34_17 | 14267 | 15469 | + | CE1 |
| pfam | MGYG000003196_34 | MGYG000003196_34_18 | 15438 | 17765 | + | LPG_synthase_C |
| TC | MGYG000003196_34 | MGYG000003196_34_19 | 17820 | 20363 | - | 3.A.1.125.3 |
| TC | MGYG000003196_34 | MGYG000003196_34_20 | 20364 | 21092 | - | 3.A.1.125.3 |
Gene ID: MGYG000003196_34_14
Type: TC
Location: 12115 - 13536 (+)
Type: TC
Location: 12115 - 13536 (+)
Gene ID: MGYG000003196_34_15
Type: pfam
Location: 13547 - 13849 (+)
Type: pfam
Location: 13547 - 13849 (+)
Gene ID: MGYG000003196_34_16
Type: pfam
Location: 13846 - 14205 (+)
Type: pfam
Location: 13846 - 14205 (+)
Gene ID: MGYG000003196_34_17
Type: CAZyme
Location: 14267 - 15469 (+)
Type: CAZyme
Location: 14267 - 15469 (+)
Gene ID: MGYG000003196_34_18
Type: pfam
Location: 15438 - 17765 (+)
Type: pfam
Location: 15438 - 17765 (+)
Gene ID: MGYG000003196_34_19
Type: TC
Location: 17820 - 20363 (-)
Type: TC
Location: 17820 - 20363 (-)
Gene ID: MGYG000003196_34_20
Type: TC
Location: 20364 - 21092 (-)
Type: TC
Location: 20364 - 21092 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium sp900539985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.