Cluster: MGYG000003192_CGC24
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003192
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003192_44 | MGYG000003192_44_1 | 118 | 2418 | - | GH2 |
| pfam | MGYG000003192_44 | MGYG000003192_44_2 | 2714 | 3622 | - | Abi_2 |
| CAZyme | MGYG000003192_44 | MGYG000003192_44_3 | 3848 | 8005 | - | GH115 |
| pfam | MGYG000003192_44 | MGYG000003192_44_4 | 8002 | 8727 | - | SLH | SLH |
| CAZyme | MGYG000003192_44 | MGYG000003192_44_5 | 9337 | 18633 | - | GH136 |
| CAZyme | MGYG000003192_44 | MGYG000003192_44_6 | 19163 | 21169 | - | GH115 |
| TC | MGYG000003192_44 | MGYG000003192_44_7 | 21179 | 22024 | - | 3.A.1.1.11 |
| TC | MGYG000003192_44 | MGYG000003192_44_8 | 22021 | 22932 | - | 3.A.1.1.11 |
| TC | MGYG000003192_44 | MGYG000003192_44_9 | 22994 | 24328 | - | 3.A.1.1.11 |
| TF | MGYG000003192_44 | MGYG000003192_44_10 | 24455 | 25966 | - | HTH_AraC |
| TC | MGYG000003192_44 | MGYG000003192_44_11 | 25959 | 27710 | - | 8.A.59.2.1 |
| STP | MGYG000003192_44 | MGYG000003192_44_12 | 27839 | 28861 | - | PfkB |
| CAZyme | MGYG000003192_44 | MGYG000003192_44_13 | 28969 | 30672 | - | GH28 |
Gene ID: MGYG000003192_44_1
Type: CAZyme
Location: 118 - 2418 (-)
Type: CAZyme
Location: 118 - 2418 (-)
Gene ID: MGYG000003192_44_2
Type: pfam
Location: 2714 - 3622 (-)
Type: pfam
Location: 2714 - 3622 (-)
Gene ID: MGYG000003192_44_3
Type: CAZyme
Location: 3848 - 8005 (-)
Type: CAZyme
Location: 3848 - 8005 (-)
Gene ID: MGYG000003192_44_4
Type: pfam
Location: 8002 - 8727 (-)
Type: pfam
Location: 8002 - 8727 (-)
Gene ID: MGYG000003192_44_5
Type: CAZyme
Location: 9337 - 18633 (-)
Type: CAZyme
Location: 9337 - 18633 (-)
Gene ID: MGYG000003192_44_6
Type: CAZyme
Location: 19163 - 21169 (-)
Type: CAZyme
Location: 19163 - 21169 (-)
Gene ID: MGYG000003192_44_7
Type: TC
Location: 21179 - 22024 (-)
Type: TC
Location: 21179 - 22024 (-)
Gene ID: MGYG000003192_44_8
Type: TC
Location: 22021 - 22932 (-)
Type: TC
Location: 22021 - 22932 (-)
Gene ID: MGYG000003192_44_9
Type: TC
Location: 22994 - 24328 (-)
Type: TC
Location: 22994 - 24328 (-)
Gene ID: MGYG000003192_44_10
Type: TF
Location: 24455 - 25966 (-)
Type: TF
Location: 24455 - 25966 (-)
Gene ID: MGYG000003192_44_11
Type: TC
Location: 25959 - 27710 (-)
Type: TC
Location: 25959 - 27710 (-)
Gene ID: MGYG000003192_44_12
Type: STP
Location: 27839 - 28861 (-)
Type: STP
Location: 27839 - 28861 (-)
Gene ID: MGYG000003192_44_13
Type: CAZyme
Location: 28969 - 30672 (-)
Type: CAZyme
Location: 28969 - 30672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Novisyntrophococcus
Species
Novisyntrophococcus sp900539175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.